Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
HMGCS1Q01581 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGCS1Q01581 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGCS1Q01581 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGCS1Q01581 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.32
HMGCS1Q01581 AC009053.2-201ENST00000563701 2365 ntBASIC17.08■□□□□ 0.32
HMGCS1Q01581 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
HMGCS1Q01581 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGCS1Q01581 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGCS1Q01581 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
HMGCS1Q01581 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGCS1Q01581 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCS1Q01581 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCS1Q01581 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCS1Q01581 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCS1Q01581 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCS1Q01581 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCS1Q01581 AL353692.3-201ENST00000407031 1396 ntBASIC17.07■□□□□ 0.32
HMGCS1Q01581 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.07■□□□□ 0.32
HMGCS1Q01581 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCS1Q01581 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCS1Q01581 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCS1Q01581 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCS1Q01581 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCS1Q01581 AK4P3-201ENST00000418260 669 ntBASIC17.07■□□□□ 0.32
HMGCS1Q01581 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.07■□□□□ 0.32
HMGCS1Q01581 AC112907.2-201ENST00000448639 330 ntBASIC17.07■□□□□ 0.32
HMGCS1Q01581 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.07■□□□□ 0.32
HMGCS1Q01581 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.07■□□□□ 0.32
HMGCS1Q01581 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCS1Q01581 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCS1Q01581 LINC01451-201ENST00000623792 534 ntBASIC17.07■□□□□ 0.32
HMGCS1Q01581 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCS1Q01581 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCS1Q01581 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCS1Q01581 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
HMGCS1Q01581 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCS1Q01581 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCS1Q01581 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.07■□□□□ 0.32
HMGCS1Q01581 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.07■□□□□ 0.32
HMGCS1Q01581 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
HMGCS1Q01581 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCS1Q01581 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCS1Q01581 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCS1Q01581 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCS1Q01581 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCS1Q01581 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCS1Q01581 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCS1Q01581 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCS1Q01581 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCS1Q01581 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCS1Q01581 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
HMGCS1Q01581 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCS1Q01581 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.06■□□□□ 0.32
HMGCS1Q01581 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCS1Q01581 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
HMGCS1Q01581 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HMGCS1Q01581 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCS1Q01581 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCS1Q01581 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.06■□□□□ 0.32
HMGCS1Q01581 HOMER2P1-201ENST00000455653 964 ntBASIC17.06■□□□□ 0.32
HMGCS1Q01581 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCS1Q01581 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCS1Q01581 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCS1Q01581 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.06■□□□□ 0.32
HMGCS1Q01581 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.06■□□□□ 0.32
HMGCS1Q01581 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.06■□□□□ 0.32
HMGCS1Q01581 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.06■□□□□ 0.32
HMGCS1Q01581 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.06■□□□□ 0.32
HMGCS1Q01581 HYMAI.1-201ENST00000620949 238 ntBASIC17.06■□□□□ 0.32
HMGCS1Q01581 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.06■□□□□ 0.32
HMGCS1Q01581 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HMGCS1Q01581 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
HMGCS1Q01581 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.06■□□□□ 0.32
HMGCS1Q01581 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCS1Q01581 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.06■□□□□ 0.32
HMGCS1Q01581 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.06■□□□□ 0.32
HMGCS1Q01581 PRORSD1P-202ENST00000563365 2154 ntBASIC17.06■□□□□ 0.32
HMGCS1Q01581 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HMGCS1Q01581 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCS1Q01581 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCS1Q01581 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCS1Q01581 AC022211.2-201ENST00000585075 2527 ntBASIC17.06■□□□□ 0.32
HMGCS1Q01581 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCS1Q01581 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCS1Q01581 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCS1Q01581 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.05■□□□□ 0.32
HMGCS1Q01581 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.05■□□□□ 0.32
HMGCS1Q01581 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCS1Q01581 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCS1Q01581 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.05■□□□□ 0.32
HMGCS1Q01581 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCS1Q01581 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCS1Q01581 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
HMGCS1Q01581 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.05■□□□□ 0.32
HMGCS1Q01581 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCS1Q01581 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCS1Q01581 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.05■□□□□ 0.32
HMGCS1Q01581 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCS1Q01581 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms