Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC15.32■□□□□ 0.04
UBA52P62987 AL136038.3-201ENST00000561909 1096 ntBASIC15.32■□□□□ 0.04
UBA52P62987 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.32■□□□□ 0.04
UBA52P62987 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.32■□□□□ 0.04
UBA52P62987 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UBA52P62987 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.32■□□□□ 0.04
UBA52P62987 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.32■□□□□ 0.04
UBA52P62987 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.32■□□□□ 0.04
UBA52P62987 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.32■□□□□ 0.04
UBA52P62987 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBA52P62987 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBA52P62987 AP001094.4-201ENST00000579008 2176 ntBASIC15.32■□□□□ 0.04
UBA52P62987 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBA52P62987 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
UBA52P62987 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.32■□□□□ 0.04
UBA52P62987 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBA52P62987 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBA52P62987 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.32■□□□□ 0.04
UBA52P62987 PP12613-201ENST00000424958 2230 ntBASIC15.32■□□□□ 0.04
UBA52P62987 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
UBA52P62987 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
UBA52P62987 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBA52P62987 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UBA52P62987 KRT8P41-201ENST00000533985 1514 ntBASIC15.32■□□□□ 0.04
UBA52P62987 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
UBA52P62987 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBA52P62987 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBA52P62987 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.32■□□□□ 0.04
UBA52P62987 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.31■□□□□ 0.04
UBA52P62987 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.31■□□□□ 0.04
UBA52P62987 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.31■□□□□ 0.04
UBA52P62987 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBA52P62987 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.31■□□□□ 0.04
UBA52P62987 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBA52P62987 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBA52P62987 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
UBA52P62987 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBA52P62987 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBA52P62987 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBA52P62987 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBA52P62987 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBA52P62987 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBA52P62987 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.31■□□□□ 0.04
UBA52P62987 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
UBA52P62987 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.31■□□□□ 0.04
UBA52P62987 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.31■□□□□ 0.04
UBA52P62987 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.31■□□□□ 0.04
UBA52P62987 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.31■□□□□ 0.04
UBA52P62987 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.31■□□□□ 0.04
UBA52P62987 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.31■□□□□ 0.04
UBA52P62987 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBA52P62987 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.31■□□□□ 0.04
UBA52P62987 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBA52P62987 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.31■□□□□ 0.04
UBA52P62987 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBA52P62987 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.31■□□□□ 0.04
UBA52P62987 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBA52P62987 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBA52P62987 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBA52P62987 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBA52P62987 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBA52P62987 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15.31■□□□□ 0.04
UBA52P62987 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.31■□□□□ 0.04
UBA52P62987 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBA52P62987 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBA52P62987 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBA52P62987 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBA52P62987 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
UBA52P62987 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBA52P62987 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBA52P62987 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBA52P62987 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBA52P62987 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
UBA52P62987 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.31■□□□□ 0.04
UBA52P62987 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
UBA52P62987 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.3■□□□□ 0.04
UBA52P62987 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBA52P62987 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBA52P62987 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBA52P62987 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBA52P62987 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBA52P62987 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
UBA52P62987 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBA52P62987 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBA52P62987 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
UBA52P62987 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
UBA52P62987 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBA52P62987 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBA52P62987 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBA52P62987 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBA52P62987 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBA52P62987 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
UBA52P62987 AC112907.2-201ENST00000448639 330 ntBASIC15.3■□□□□ 0.04
UBA52P62987 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.3■□□□□ 0.04
UBA52P62987 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC15.3■□□□□ 0.04
UBA52P62987 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
UBA52P62987 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.3■□□□□ 0.04
UBA52P62987 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC15.3■□□□□ 0.04
UBA52P62987 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.3■□□□□ 0.04
UBA52P62987 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms