Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
SNRPEP62304 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNRPEP62304 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.56□□□□□ -0.24
SNRPEP62304 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNRPEP62304 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC13.56□□□□□ -0.24
SNRPEP62304 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNRPEP62304 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SNRPEP62304 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNRPEP62304 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
SNRPEP62304 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNRPEP62304 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC13.56□□□□□ -0.24
SNRPEP62304 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC13.56□□□□□ -0.24
SNRPEP62304 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNRPEP62304 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SNRPEP62304 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNRPEP62304 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNRPEP62304 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SNRPEP62304 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNRPEP62304 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.56□□□□□ -0.24
SNRPEP62304 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC13.56□□□□□ -0.24
SNRPEP62304 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
SNRPEP62304 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SNRPEP62304 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SNRPEP62304 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
SNRPEP62304 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SNRPEP62304 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNRPEP62304 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNRPEP62304 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SNRPEP62304 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SNRPEP62304 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SNRPEP62304 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SNRPEP62304 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNRPEP62304 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.56□□□□□ -0.24
SNRPEP62304 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SNRPEP62304 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNRPEP62304 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
SNRPEP62304 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNRPEP62304 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNRPEP62304 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNRPEP62304 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SNRPEP62304 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SNRPEP62304 AC007191.1-201ENST00000623179 2995 ntBASIC13.56□□□□□ -0.24
SNRPEP62304 AL391807.1-203ENST00000604392 2365 ntBASIC13.56□□□□□ -0.24
SNRPEP62304 AC106881.1-201ENST00000605849 3329 ntBASIC13.56□□□□□ -0.24
SNRPEP62304 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SNRPEP62304 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNRPEP62304 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNRPEP62304 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNRPEP62304 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SNRPEP62304 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNRPEP62304 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNRPEP62304 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC13.55□□□□□ -0.24
SNRPEP62304 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SNRPEP62304 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNRPEP62304 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.55□□□□□ -0.24
SNRPEP62304 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
SNRPEP62304 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.55□□□□□ -0.24
SNRPEP62304 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNRPEP62304 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SNRPEP62304 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNRPEP62304 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC13.55□□□□□ -0.24
SNRPEP62304 HLA-G-202ENST00000376815 851 ntBASIC13.55□□□□□ -0.24
SNRPEP62304 HLA-G-203ENST00000376818 1127 ntBASIC13.55□□□□□ -0.24
SNRPEP62304 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNRPEP62304 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC13.55□□□□□ -0.24
SNRPEP62304 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC13.55□□□□□ -0.24
SNRPEP62304 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SNRPEP62304 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC13.55□□□□□ -0.24
SNRPEP62304 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.55□□□□□ -0.24
SNRPEP62304 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SNRPEP62304 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SNRPEP62304 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNRPEP62304 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SNRPEP62304 PHGDH-209ENST00000641074 1780 ntBASIC13.55□□□□□ -0.24
SNRPEP62304 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNRPEP62304 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.55□□□□□ -0.24
SNRPEP62304 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNRPEP62304 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNRPEP62304 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SNRPEP62304 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.55□□□□□ -0.24
SNRPEP62304 AC018553.1-201ENST00000616682 1458 ntBASIC13.55□□□□□ -0.24
SNRPEP62304 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.55□□□□□ -0.24
SNRPEP62304 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNRPEP62304 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNRPEP62304 CICP20-201ENST00000443330 2801 ntBASIC13.54□□□□□ -0.24
SNRPEP62304 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SNRPEP62304 AC078925.2-201ENST00000624013 1973 ntBASIC13.54□□□□□ -0.24
SNRPEP62304 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNRPEP62304 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNRPEP62304 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.54□□□□□ -0.24
SNRPEP62304 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.54□□□□□ -0.24
SNRPEP62304 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SNRPEP62304 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SNRPEP62304 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SNRPEP62304 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.54□□□□□ -0.24
SNRPEP62304 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNRPEP62304 MIR600HG-201ENST00000449175 5984 ntBASIC13.54□□□□□ -0.24
SNRPEP62304 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNRPEP62304 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNRPEP62304 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms