Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 AICDA-202ENST00000537228 667 ntTSL 5 BASIC13.88□□□□□ -0.19
RAB5BP61020 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB5BP61020 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAB5BP61020 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB5BP61020 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RAB5BP61020 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB5BP61020 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RAB5BP61020 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAB5BP61020 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB5BP61020 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAB5BP61020 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RAB5BP61020 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RAB5BP61020 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.88□□□□□ -0.19
RAB5BP61020 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB5BP61020 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB5BP61020 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.88□□□□□ -0.19
RAB5BP61020 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RAB5BP61020 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RAB5BP61020 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RAB5BP61020 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAB5BP61020 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB5BP61020 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
RAB5BP61020 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB5BP61020 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB5BP61020 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB5BP61020 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB5BP61020 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.87□□□□□ -0.19
RAB5BP61020 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB5BP61020 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB5BP61020 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.87□□□□□ -0.19
RAB5BP61020 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.87□□□□□ -0.19
RAB5BP61020 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB5BP61020 BX842568.3-201ENST00000418104 571 ntBASIC13.87□□□□□ -0.19
RAB5BP61020 KRT16P3-201ENST00000439127 1283 ntBASIC13.87□□□□□ -0.19
RAB5BP61020 RARRES2P1-201ENST00000474487 481 ntBASIC13.87□□□□□ -0.19
RAB5BP61020 IGHV3-19-201ENST00000521488 291 ntBASIC13.87□□□□□ -0.19
RAB5BP61020 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC13.87□□□□□ -0.19
RAB5BP61020 AC138907.5-202ENST00000569484 235 ntBASIC13.87□□□□□ -0.19
RAB5BP61020 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.87□□□□□ -0.19
RAB5BP61020 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB5BP61020 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.87□□□□□ -0.19
RAB5BP61020 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB5BP61020 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.87□□□□□ -0.19
RAB5BP61020 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAB5BP61020 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB5BP61020 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB5BP61020 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB5BP61020 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB5BP61020 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
RAB5BP61020 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB5BP61020 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAB5BP61020 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB5BP61020 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAB5BP61020 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB5BP61020 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.87□□□□□ -0.19
RAB5BP61020 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB5BP61020 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB5BP61020 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB5BP61020 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB5BP61020 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB5BP61020 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB5BP61020 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
RAB5BP61020 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB5BP61020 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB5BP61020 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB5BP61020 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC13.86□□□□□ -0.19
RAB5BP61020 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB5BP61020 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
RAB5BP61020 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
RAB5BP61020 HEIH-201ENST00000623091 1652 ntBASIC13.86□□□□□ -0.19
RAB5BP61020 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC13.86□□□□□ -0.19
RAB5BP61020 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC13.86□□□□□ -0.19
RAB5BP61020 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB5BP61020 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB5BP61020 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB5BP61020 AC091799.1-201ENST00000422823 811 ntBASIC13.86□□□□□ -0.19
RAB5BP61020 CREM-229ENST00000474362 1030 ntTSL 2 BASIC13.86□□□□□ -0.19
RAB5BP61020 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
RAB5BP61020 AC087633.2-202ENST00000565166 1439 ntBASIC13.86□□□□□ -0.19
RAB5BP61020 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB5BP61020 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB5BP61020 TNRC18P2-201ENST00000417666 2714 ntBASIC13.86□□□□□ -0.19
RAB5BP61020 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
RAB5BP61020 AC060834.1-201ENST00000443027 2032 ntBASIC13.86□□□□□ -0.19
RAB5BP61020 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.86□□□□□ -0.19
RAB5BP61020 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
RAB5BP61020 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB5BP61020 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
RAB5BP61020 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB5BP61020 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB5BP61020 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB5BP61020 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB5BP61020 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB5BP61020 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
RAB5BP61020 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.85□□□□□ -0.19
RAB5BP61020 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC13.85□□□□□ -0.19
RAB5BP61020 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB5BP61020 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAB5BP61020 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
RAB5BP61020 KRT18P55-202ENST00000578578 1546 ntBASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms