Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDC42P60953 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.21■□□□□ 0.18
CDC42P60953 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
CDC42P60953 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDC42P60953 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDC42P60953 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
CDC42P60953 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.21■□□□□ 0.18
CDC42P60953 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
CDC42P60953 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC42P60953 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CDC42P60953 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC42P60953 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC42P60953 UBALD1-205ENST00000590891 2641 ntBASIC16.2■□□□□ 0.18
CDC42P60953 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC42P60953 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.2■□□□□ 0.18
CDC42P60953 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC42P60953 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CDC42P60953 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC42P60953 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDC42P60953 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.2■□□□□ 0.18
CDC42P60953 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC42P60953 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.2■□□□□ 0.18
CDC42P60953 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC42P60953 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC42P60953 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.2■□□□□ 0.18
CDC42P60953 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.2■□□□□ 0.18
CDC42P60953 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC42P60953 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.2■□□□□ 0.18
CDC42P60953 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.2■□□□□ 0.18
CDC42P60953 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.2■□□□□ 0.18
CDC42P60953 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.2■□□□□ 0.18
CDC42P60953 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.2■□□□□ 0.18
CDC42P60953 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDC42P60953 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.2■□□□□ 0.18
CDC42P60953 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.2■□□□□ 0.18
CDC42P60953 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.2■□□□□ 0.18
CDC42P60953 AC006058.3-201ENST00000606217 1069 ntBASIC16.2■□□□□ 0.18
CDC42P60953 CR769767.2-201ENST00000622735 460 ntBASIC16.2■□□□□ 0.18
CDC42P60953 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.2■□□□□ 0.18
CDC42P60953 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDC42P60953 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CDC42P60953 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC42P60953 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.2■□□□□ 0.18
CDC42P60953 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC42P60953 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.2■□□□□ 0.18
CDC42P60953 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CDC42P60953 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CDC42P60953 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC42P60953 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC42P60953 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.2■□□□□ 0.18
CDC42P60953 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.19■□□□□ 0.18
CDC42P60953 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.19■□□□□ 0.18
CDC42P60953 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDC42P60953 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDC42P60953 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDC42P60953 REXO1L11P-201ENST00000620964 1927 ntBASIC16.19■□□□□ 0.18
CDC42P60953 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.19■□□□□ 0.18
CDC42P60953 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
CDC42P60953 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CDC42P60953 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.19■□□□□ 0.18
CDC42P60953 PCDHA14-201ENST00000506751 2298 ntBASIC16.19■□□□□ 0.18
CDC42P60953 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDC42P60953 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDC42P60953 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDC42P60953 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDC42P60953 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDC42P60953 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CDC42P60953 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.19■□□□□ 0.18
CDC42P60953 AC116562.2-201ENST00000507042 360 ntBASIC16.19■□□□□ 0.18
CDC42P60953 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CDC42P60953 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDC42P60953 CD177P1-201ENST00000606252 935 ntBASIC16.19■□□□□ 0.18
CDC42P60953 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDC42P60953 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDC42P60953 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
CDC42P60953 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDC42P60953 AC009949.1-201ENST00000623048 1830 ntBASIC16.19■□□□□ 0.18
CDC42P60953 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDC42P60953 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDC42P60953 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDC42P60953 AC016396.2-201ENST00000562575 1417 ntBASIC16.19■□□□□ 0.18
CDC42P60953 PCDHB19P-201ENST00000570871 2371 ntBASIC16.19■□□□□ 0.18
CDC42P60953 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDC42P60953 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
CDC42P60953 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CDC42P60953 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDC42P60953 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.18■□□□□ 0.18
CDC42P60953 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDC42P60953 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDC42P60953 AC105020.1-201ENST00000435356 2205 ntBASIC16.18■□□□□ 0.18
CDC42P60953 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDC42P60953 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDC42P60953 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDC42P60953 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
CDC42P60953 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDC42P60953 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.18■□□□□ 0.18
CDC42P60953 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDC42P60953 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDC42P60953 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.18■□□□□ 0.18
CDC42P60953 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms