Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AL133373.2-201ENST00000623187 2828 ntBASIC23.14■■□□□ 1.29
RIPK4P57078 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RIPK4P57078 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC23.14■■□□□ 1.29
RIPK4P57078 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
RIPK4P57078 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
RIPK4P57078 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC23.14■■□□□ 1.29
RIPK4P57078 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC23.14■■□□□ 1.29
RIPK4P57078 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
RIPK4P57078 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
RIPK4P57078 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
RIPK4P57078 AC132938.5-201ENST00000624980 1813 ntBASIC23.13■■□□□ 1.29
RIPK4P57078 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
RIPK4P57078 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RIPK4P57078 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RIPK4P57078 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RIPK4P57078 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC23.13■■□□□ 1.29
RIPK4P57078 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC23.13■■□□□ 1.29
RIPK4P57078 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RIPK4P57078 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC23.13■■□□□ 1.29
RIPK4P57078 AC073592.5-201ENST00000624854 528 ntBASIC23.13■■□□□ 1.29
RIPK4P57078 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC23.13■■□□□ 1.29
RIPK4P57078 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC23.13■■□□□ 1.29
RIPK4P57078 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RIPK4P57078 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RIPK4P57078 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RIPK4P57078 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
RIPK4P57078 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RIPK4P57078 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC23.13■■□□□ 1.29
RIPK4P57078 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
RIPK4P57078 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC23.12■■□□□ 1.29
RIPK4P57078 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RIPK4P57078 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
RIPK4P57078 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
RIPK4P57078 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
RIPK4P57078 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC23.12■■□□□ 1.29
RIPK4P57078 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC23.12■■□□□ 1.29
RIPK4P57078 AC005104.2-201ENST00000427818 678 ntBASIC23.12■■□□□ 1.29
RIPK4P57078 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
RIPK4P57078 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RIPK4P57078 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
RIPK4P57078 GATB-213ENST00000515812 1893 ntTSL 5 BASIC23.12■■□□□ 1.29
RIPK4P57078 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
RIPK4P57078 SART3-203ENST00000546611 1184 ntBASIC23.12■■□□□ 1.29
RIPK4P57078 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC23.12■■□□□ 1.29
RIPK4P57078 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC23.12■■□□□ 1.29
RIPK4P57078 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
RIPK4P57078 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
RIPK4P57078 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
RIPK4P57078 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RIPK4P57078 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
RIPK4P57078 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RIPK4P57078 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
RIPK4P57078 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RIPK4P57078 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RIPK4P57078 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RIPK4P57078 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
RIPK4P57078 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RIPK4P57078 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
RIPK4P57078 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RIPK4P57078 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
RIPK4P57078 AC134043.2-201ENST00000624206 2238 ntBASIC23.11■■□□□ 1.29
RIPK4P57078 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC23.11■■□□□ 1.29
RIPK4P57078 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC23.11■■□□□ 1.29
RIPK4P57078 FAM197Y8-203ENST00000450145 560 ntBASIC23.11■■□□□ 1.29
RIPK4P57078 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC23.11■■□□□ 1.29
RIPK4P57078 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC23.11■■□□□ 1.29
RIPK4P57078 IRF8-202ENST00000562492 946 ntTSL 3 BASIC23.11■■□□□ 1.29
RIPK4P57078 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC23.11■■□□□ 1.29
RIPK4P57078 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC23.11■■□□□ 1.29
RIPK4P57078 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RIPK4P57078 NOC2LP2-201ENST00000407594 1944 ntBASIC23.11■■□□□ 1.29
RIPK4P57078 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC23.11■■□□□ 1.29
RIPK4P57078 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RIPK4P57078 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
RIPK4P57078 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
RIPK4P57078 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
RIPK4P57078 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC23.11■■□□□ 1.29
RIPK4P57078 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC23.11■■□□□ 1.29
RIPK4P57078 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RIPK4P57078 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RIPK4P57078 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC23.11■■□□□ 1.29
RIPK4P57078 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RIPK4P57078 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
RIPK4P57078 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RIPK4P57078 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
RIPK4P57078 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RIPK4P57078 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RIPK4P57078 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RIPK4P57078 AL355312.1-201ENST00000407115 2176 ntBASIC23.1■■□□□ 1.29
RIPK4P57078 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RIPK4P57078 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
RIPK4P57078 AC068880.1-201ENST00000507289 2297 ntBASIC23.1■■□□□ 1.29
RIPK4P57078 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC23.1■■□□□ 1.29
RIPK4P57078 FUT8-AS1-201ENST00000621019 1521 ntBASIC23.1■■□□□ 1.29
RIPK4P57078 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC23.1■■□□□ 1.29
RIPK4P57078 TLE1-202ENST00000376484 666 ntTSL 3 BASIC23.1■■□□□ 1.29
RIPK4P57078 MRPL3P1-201ENST00000400109 1033 ntBASIC23.1■■□□□ 1.29
RIPK4P57078 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC23.1■■□□□ 1.29
RIPK4P57078 NKTR-203ENST00000442970 646 ntTSL 2 BASIC23.1■■□□□ 1.29
RIPK4P57078 FDX1P1-201ENST00000449115 551 ntBASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms