Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC4P55056 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
APOC4P55056 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC12.97□□□□□ -0.33
APOC4P55056 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC4P55056 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC4P55056 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC4P55056 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC4P55056 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC4P55056 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
APOC4P55056 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC4P55056 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
APOC4P55056 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC4P55056 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC4P55056 AC087289.5-201ENST00000586076 3175 ntBASIC12.97□□□□□ -0.33
APOC4P55056 REXO1L9P-201ENST00000604264 2108 ntBASIC12.97□□□□□ -0.33
APOC4P55056 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC12.97□□□□□ -0.33
APOC4P55056 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC4P55056 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
APOC4P55056 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC12.96□□□□□ -0.33
APOC4P55056 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOC4P55056 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
APOC4P55056 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOC4P55056 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOC4P55056 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOC4P55056 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
APOC4P55056 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC12.96□□□□□ -0.33
APOC4P55056 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.33
APOC4P55056 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOC4P55056 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOC4P55056 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
APOC4P55056 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC12.96□□□□□ -0.33
APOC4P55056 TLE1-202ENST00000376484 666 ntTSL 3 BASIC12.96□□□□□ -0.33
APOC4P55056 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC12.96□□□□□ -0.33
APOC4P55056 NKTR-203ENST00000442970 646 ntTSL 2 BASIC12.96□□□□□ -0.33
APOC4P55056 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC12.96□□□□□ -0.33
APOC4P55056 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
APOC4P55056 IGHV3-52-201ENST00000519770 353 ntBASIC12.96□□□□□ -0.33
APOC4P55056 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.96□□□□□ -0.33
APOC4P55056 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC12.96□□□□□ -0.33
APOC4P55056 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC12.96□□□□□ -0.33
APOC4P55056 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
APOC4P55056 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC12.96□□□□□ -0.33
APOC4P55056 SLC25A6P4-201ENST00000586535 553 ntBASIC12.96□□□□□ -0.33
APOC4P55056 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
APOC4P55056 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOC4P55056 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
APOC4P55056 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOC4P55056 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
APOC4P55056 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
APOC4P55056 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
APOC4P55056 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
APOC4P55056 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
APOC4P55056 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC12.96□□□□□ -0.34
APOC4P55056 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
APOC4P55056 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC12.96□□□□□ -0.34
APOC4P55056 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
APOC4P55056 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
APOC4P55056 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
APOC4P55056 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
APOC4P55056 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
APOC4P55056 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC4P55056 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
APOC4P55056 ADM-208ENST00000534464 1640 ntTSL 2 BASIC12.95□□□□□ -0.34
APOC4P55056 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC12.95□□□□□ -0.34
APOC4P55056 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC4P55056 AC010460.3-201ENST00000511359 1579 ntBASIC12.95□□□□□ -0.34
APOC4P55056 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC4P55056 AC004408.2-201ENST00000623613 2777 ntBASIC12.95□□□□□ -0.34
APOC4P55056 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC4P55056 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC4P55056 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC4P55056 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC4P55056 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
APOC4P55056 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC12.95□□□□□ -0.34
APOC4P55056 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC4P55056 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC4P55056 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC4P55056 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC12.95□□□□□ -0.34
APOC4P55056 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
APOC4P55056 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC4P55056 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
APOC4P55056 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC4P55056 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
APOC4P55056 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC4P55056 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC12.95□□□□□ -0.34
APOC4P55056 RNPS1P1-201ENST00000507437 918 ntBASIC12.95□□□□□ -0.34
APOC4P55056 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC12.95□□□□□ -0.34
APOC4P55056 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC12.95□□□□□ -0.34
APOC4P55056 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC12.95□□□□□ -0.34
APOC4P55056 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
APOC4P55056 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC12.95□□□□□ -0.34
APOC4P55056 TP73-AS1-207ENST00000624167 988 ntBASIC12.95□□□□□ -0.34
APOC4P55056 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC12.95□□□□□ -0.34
APOC4P55056 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
APOC4P55056 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
APOC4P55056 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC4P55056 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
APOC4P55056 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC12.95□□□□□ -0.34
APOC4P55056 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC12.95□□□□□ -0.34
APOC4P55056 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms