Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.24■□□□□ 0.51
PTPN5P54829 KRT18P2-201ENST00000447938 1258 ntBASIC18.24■□□□□ 0.51
PTPN5P54829 AC108751.1-201ENST00000490852 363 ntBASIC18.24■□□□□ 0.51
PTPN5P54829 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.24■□□□□ 0.51
PTPN5P54829 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN5P54829 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.24■□□□□ 0.51
PTPN5P54829 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PTPN5P54829 AC011467.2-201ENST00000598425 242 ntBASIC18.24■□□□□ 0.51
PTPN5P54829 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC18.24■□□□□ 0.51
PTPN5P54829 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN5P54829 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PTPN5P54829 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN5P54829 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.24■□□□□ 0.51
PTPN5P54829 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN5P54829 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN5P54829 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN5P54829 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
PTPN5P54829 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PTPN5P54829 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.24■□□□□ 0.51
PTPN5P54829 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.24■□□□□ 0.51
PTPN5P54829 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN5P54829 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN5P54829 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PTPN5P54829 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN5P54829 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN5P54829 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN5P54829 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN5P54829 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN5P54829 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.23■□□□□ 0.51
PTPN5P54829 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN5P54829 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.23■□□□□ 0.51
PTPN5P54829 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.23■□□□□ 0.51
PTPN5P54829 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN5P54829 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN5P54829 AC005225.4-201ENST00000557330 545 ntBASIC18.23■□□□□ 0.51
PTPN5P54829 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.23■□□□□ 0.51
PTPN5P54829 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.23■□□□□ 0.51
PTPN5P54829 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.23■□□□□ 0.51
PTPN5P54829 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.23■□□□□ 0.51
PTPN5P54829 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.23■□□□□ 0.51
PTPN5P54829 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.23■□□□□ 0.51
PTPN5P54829 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.23■□□□□ 0.51
PTPN5P54829 Z92544.3-201ENST00000624747 417 ntBASIC18.23■□□□□ 0.51
PTPN5P54829 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.23■□□□□ 0.51
PTPN5P54829 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN5P54829 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN5P54829 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN5P54829 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PTPN5P54829 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN5P54829 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.23■□□□□ 0.51
PTPN5P54829 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN5P54829 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN5P54829 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN5P54829 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.22■□□□□ 0.51
PTPN5P54829 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.22■□□□□ 0.51
PTPN5P54829 AC009113.1-201ENST00000570267 2443 ntBASIC18.22■□□□□ 0.51
PTPN5P54829 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN5P54829 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN5P54829 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN5P54829 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN5P54829 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN5P54829 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN5P54829 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.22■□□□□ 0.51
PTPN5P54829 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.22■□□□□ 0.51
PTPN5P54829 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PTPN5P54829 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.22■□□□□ 0.51
PTPN5P54829 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.22■□□□□ 0.51
PTPN5P54829 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.22■□□□□ 0.51
PTPN5P54829 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.22■□□□□ 0.51
PTPN5P54829 STK33P1-201ENST00000423835 1218 ntBASIC18.22■□□□□ 0.51
PTPN5P54829 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.22■□□□□ 0.51
PTPN5P54829 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.22■□□□□ 0.51
PTPN5P54829 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN5P54829 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN5P54829 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN5P54829 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN5P54829 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.22■□□□□ 0.51
PTPN5P54829 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.22■□□□□ 0.51
PTPN5P54829 AL078644.1-201ENST00000609881 752 ntBASIC18.22■□□□□ 0.51
PTPN5P54829 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.22■□□□□ 0.51
PTPN5P54829 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN5P54829 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN5P54829 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN5P54829 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PTPN5P54829 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PTPN5P54829 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN5P54829 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.22■□□□□ 0.51
PTPN5P54829 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN5P54829 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.22■□□□□ 0.51
PTPN5P54829 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PTPN5P54829 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN5P54829 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PTPN5P54829 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PTPN5P54829 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN5P54829 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN5P54829 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN5P54829 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.21■□□□□ 0.51
PTPN5P54829 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN5P54829 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN5P54829 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms