Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATN1P54259 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATN1P54259 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATN1P54259 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.42■□□□□ 0.7
ATN1P54259 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATN1P54259 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC19.42■□□□□ 0.7
ATN1P54259 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATN1P54259 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.42■□□□□ 0.7
ATN1P54259 DUX4L27-201ENST00000554796 1261 ntBASIC19.42■□□□□ 0.7
ATN1P54259 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATN1P54259 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATN1P54259 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.42■□□□□ 0.7
ATN1P54259 GGTLC5P-201ENST00000617623 998 ntBASIC19.42■□□□□ 0.7
ATN1P54259 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATN1P54259 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATN1P54259 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATN1P54259 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATN1P54259 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATN1P54259 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATN1P54259 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.42■□□□□ 0.7
ATN1P54259 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.41■□□□□ 0.7
ATN1P54259 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.41■□□□□ 0.7
ATN1P54259 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATN1P54259 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.41■□□□□ 0.7
ATN1P54259 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATN1P54259 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
ATN1P54259 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.41■□□□□ 0.7
ATN1P54259 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATN1P54259 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATN1P54259 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.41■□□□□ 0.7
ATN1P54259 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATN1P54259 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATN1P54259 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATN1P54259 AP002414.1-201ENST00000391405 1147 ntBASIC19.41■□□□□ 0.7
ATN1P54259 AC015922.1-201ENST00000421102 1152 ntBASIC19.41■□□□□ 0.7
ATN1P54259 EIF2S2P5-201ENST00000457635 968 ntBASIC19.41■□□□□ 0.7
ATN1P54259 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATN1P54259 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.41■□□□□ 0.7
ATN1P54259 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC19.41■□□□□ 0.7
ATN1P54259 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.41■□□□□ 0.7
ATN1P54259 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.41■□□□□ 0.7
ATN1P54259 AC068137.2-201ENST00000605408 478 ntBASIC19.41■□□□□ 0.7
ATN1P54259 REXO1L3P-201ENST00000622202 1288 ntBASIC19.41■□□□□ 0.7
ATN1P54259 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATN1P54259 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.41■□□□□ 0.7
ATN1P54259 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATN1P54259 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
ATN1P54259 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.41■□□□□ 0.7
ATN1P54259 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.41■□□□□ 0.7
ATN1P54259 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
ATN1P54259 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATN1P54259 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
ATN1P54259 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATN1P54259 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATN1P54259 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ATN1P54259 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATN1P54259 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
ATN1P54259 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATN1P54259 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATN1P54259 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.4■□□□□ 0.7
ATN1P54259 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATN1P54259 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATN1P54259 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATN1P54259 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATN1P54259 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATN1P54259 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATN1P54259 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.4■□□□□ 0.7
ATN1P54259 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.4■□□□□ 0.7
ATN1P54259 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATN1P54259 AC109462.3-201ENST00000573934 613 ntBASIC19.4■□□□□ 0.7
ATN1P54259 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.4■□□□□ 0.7
ATN1P54259 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.4■□□□□ 0.7
ATN1P54259 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ATN1P54259 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATN1P54259 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATN1P54259 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATN1P54259 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATN1P54259 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.4■□□□□ 0.7
ATN1P54259 AC092919.2-201ENST00000623631 1645 ntBASIC19.4■□□□□ 0.7
ATN1P54259 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.4■□□□□ 0.7
ATN1P54259 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
ATN1P54259 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ATN1P54259 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ATN1P54259 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ATN1P54259 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.39■□□□□ 0.7
ATN1P54259 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.39■□□□□ 0.69
ATN1P54259 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.39■□□□□ 0.69
ATN1P54259 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATN1P54259 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATN1P54259 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATN1P54259 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.39■□□□□ 0.69
ATN1P54259 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.39■□□□□ 0.69
ATN1P54259 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.39■□□□□ 0.69
ATN1P54259 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATN1P54259 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.39■□□□□ 0.69
ATN1P54259 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
ATN1P54259 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
ATN1P54259 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.39■□□□□ 0.69
ATN1P54259 ETFRF1-205ENST00000555711 783 ntTSL 3 BASIC19.39■□□□□ 0.69
ATN1P54259 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms