Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 SART3-203ENST00000546611 1184 ntBASIC19.13■□□□□ 0.65
TNFSF9P41273 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.13■□□□□ 0.65
TNFSF9P41273 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TNFSF9P41273 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TNFSF9P41273 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
TNFSF9P41273 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.13■□□□□ 0.65
TNFSF9P41273 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.13■□□□□ 0.65
TNFSF9P41273 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TNFSF9P41273 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.13■□□□□ 0.65
TNFSF9P41273 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.13■□□□□ 0.65
TNFSF9P41273 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFSF9P41273 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFSF9P41273 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.13■□□□□ 0.65
TNFSF9P41273 NOC2LP2-201ENST00000407594 1944 ntBASIC19.13■□□□□ 0.65
TNFSF9P41273 AL355312.1-201ENST00000407115 2176 ntBASIC19.13■□□□□ 0.65
TNFSF9P41273 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFSF9P41273 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFSF9P41273 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.13■□□□□ 0.65
TNFSF9P41273 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TNFSF9P41273 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFSF9P41273 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFSF9P41273 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFSF9P41273 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.12■□□□□ 0.65
TNFSF9P41273 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFSF9P41273 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TNFSF9P41273 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.12■□□□□ 0.65
TNFSF9P41273 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFSF9P41273 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
TNFSF9P41273 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.12■□□□□ 0.65
TNFSF9P41273 MRPL3P1-201ENST00000400109 1033 ntBASIC19.12■□□□□ 0.65
TNFSF9P41273 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.12■□□□□ 0.65
TNFSF9P41273 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.12■□□□□ 0.65
TNFSF9P41273 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFSF9P41273 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
TNFSF9P41273 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.12■□□□□ 0.65
TNFSF9P41273 AC073592.5-201ENST00000624854 528 ntBASIC19.12■□□□□ 0.65
TNFSF9P41273 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFSF9P41273 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFSF9P41273 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFSF9P41273 AC004817.3-201ENST00000602957 2129 ntBASIC19.12■□□□□ 0.65
TNFSF9P41273 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFSF9P41273 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFSF9P41273 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TNFSF9P41273 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFSF9P41273 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TNFSF9P41273 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFSF9P41273 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TNFSF9P41273 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.11■□□□□ 0.65
TNFSF9P41273 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.11■□□□□ 0.65
TNFSF9P41273 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.11■□□□□ 0.65
TNFSF9P41273 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.11■□□□□ 0.65
TNFSF9P41273 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TNFSF9P41273 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.11■□□□□ 0.65
TNFSF9P41273 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.11■□□□□ 0.65
TNFSF9P41273 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.11■□□□□ 0.65
TNFSF9P41273 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TNFSF9P41273 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.11■□□□□ 0.65
TNFSF9P41273 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TNFSF9P41273 AC148477.8-201ENST00000624298 468 ntBASIC19.11■□□□□ 0.65
TNFSF9P41273 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TNFSF9P41273 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFSF9P41273 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TNFSF9P41273 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
TNFSF9P41273 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TNFSF9P41273 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TNFSF9P41273 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.11■□□□□ 0.65
TNFSF9P41273 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFSF9P41273 LINC00304-203ENST00000565008 1864 ntBASIC19.11■□□□□ 0.65
TNFSF9P41273 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFSF9P41273 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TNFSF9P41273 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.11■□□□□ 0.65
TNFSF9P41273 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
TNFSF9P41273 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TNFSF9P41273 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.11■□□□□ 0.65
TNFSF9P41273 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
TNFSF9P41273 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.1■□□□□ 0.65
TNFSF9P41273 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TNFSF9P41273 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
TNFSF9P41273 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.1■□□□□ 0.65
TNFSF9P41273 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TNFSF9P41273 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.1■□□□□ 0.65
TNFSF9P41273 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.1■□□□□ 0.65
TNFSF9P41273 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TNFSF9P41273 AC005104.2-201ENST00000427818 678 ntBASIC19.1■□□□□ 0.65
TNFSF9P41273 FDX1P1-201ENST00000449115 551 ntBASIC19.1■□□□□ 0.65
TNFSF9P41273 FAM197Y8-203ENST00000450145 560 ntBASIC19.1■□□□□ 0.65
TNFSF9P41273 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
TNFSF9P41273 SLC25A6P4-201ENST00000586535 553 ntBASIC19.1■□□□□ 0.65
TNFSF9P41273 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.1■□□□□ 0.65
TNFSF9P41273 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFSF9P41273 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFSF9P41273 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TNFSF9P41273 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFSF9P41273 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFSF9P41273 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TNFSF9P41273 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TNFSF9P41273 AC148477.5-201ENST00000625164 1645 ntBASIC19.1■□□□□ 0.65
TNFSF9P41273 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TNFSF9P41273 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
TNFSF9P41273 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms