Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCK1P35558 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
PCK1P35558 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCK1P35558 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCK1P35558 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PCK1P35558 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PCK1P35558 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCK1P35558 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCK1P35558 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCK1P35558 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCK1P35558 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCK1P35558 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCK1P35558 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCK1P35558 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
PCK1P35558 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCK1P35558 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCK1P35558 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCK1P35558 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCK1P35558 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCK1P35558 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCK1P35558 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.66■□□□□ 0.58
PCK1P35558 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCK1P35558 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.66■□□□□ 0.58
PCK1P35558 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCK1P35558 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCK1P35558 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.66■□□□□ 0.58
PCK1P35558 DDX43P3-201ENST00000441064 443 ntBASIC18.66■□□□□ 0.58
PCK1P35558 AC112698.1-201ENST00000510299 916 ntBASIC18.66■□□□□ 0.58
PCK1P35558 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCK1P35558 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCK1P35558 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCK1P35558 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCK1P35558 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCK1P35558 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCK1P35558 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCK1P35558 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.66■□□□□ 0.58
PCK1P35558 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCK1P35558 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCK1P35558 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCK1P35558 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PCK1P35558 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PCK1P35558 CROCCP1-201ENST00000426910 5675 ntBASIC18.66■□□□□ 0.58
PCK1P35558 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCK1P35558 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCK1P35558 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCK1P35558 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCK1P35558 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
PCK1P35558 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.65■□□□□ 0.58
PCK1P35558 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.65■□□□□ 0.58
PCK1P35558 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
PCK1P35558 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
PCK1P35558 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PCK1P35558 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCK1P35558 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.65■□□□□ 0.58
PCK1P35558 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCK1P35558 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCK1P35558 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCK1P35558 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.65■□□□□ 0.58
PCK1P35558 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.65■□□□□ 0.58
PCK1P35558 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.65■□□□□ 0.58
PCK1P35558 RNF126P1-202ENST00000569893 925 ntBASIC18.65■□□□□ 0.58
PCK1P35558 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.65■□□□□ 0.58
PCK1P35558 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.65■□□□□ 0.58
PCK1P35558 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.65■□□□□ 0.58
PCK1P35558 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCK1P35558 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCK1P35558 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PCK1P35558 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.65■□□□□ 0.58
PCK1P35558 AC009949.1-201ENST00000623048 1830 ntBASIC18.65■□□□□ 0.58
PCK1P35558 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCK1P35558 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.65■□□□□ 0.58
PCK1P35558 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCK1P35558 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCK1P35558 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PCK1P35558 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCK1P35558 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCK1P35558 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCK1P35558 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCK1P35558 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
PCK1P35558 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCK1P35558 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCK1P35558 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
PCK1P35558 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCK1P35558 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.64■□□□□ 0.57
PCK1P35558 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.64■□□□□ 0.57
PCK1P35558 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.64■□□□□ 0.57
PCK1P35558 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
PCK1P35558 AC068472.1-201ENST00000474589 881 ntBASIC18.64■□□□□ 0.57
PCK1P35558 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
PCK1P35558 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.64■□□□□ 0.57
PCK1P35558 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.64■□□□□ 0.57
PCK1P35558 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.64■□□□□ 0.57
PCK1P35558 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCK1P35558 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCK1P35558 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCK1P35558 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.64■□□□□ 0.57
PCK1P35558 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PCK1P35558 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCK1P35558 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.64■□□□□ 0.57
PCK1P35558 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms