Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC004817.3-201ENST00000602957 2129 ntBASIC18.15■□□□□ 0.5
SLC6A4P31645 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A4P31645 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A4P31645 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC6A4P31645 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A4P31645 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A4P31645 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A4P31645 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A4P31645 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.15■□□□□ 0.5
SLC6A4P31645 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A4P31645 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A4P31645 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A4P31645 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SLC6A4P31645 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
SLC6A4P31645 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.14■□□□□ 0.5
SLC6A4P31645 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.14■□□□□ 0.5
SLC6A4P31645 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SLC6A4P31645 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.14■□□□□ 0.5
SLC6A4P31645 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SLC6A4P31645 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC6A4P31645 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.14■□□□□ 0.49
SLC6A4P31645 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
SLC6A4P31645 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC6A4P31645 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC6A4P31645 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC6A4P31645 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC6A4P31645 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.14■□□□□ 0.49
SLC6A4P31645 AF186996.4-201ENST00000467186 377 ntBASIC18.14■□□□□ 0.49
SLC6A4P31645 BX005266.1-201ENST00000473402 457 ntBASIC18.14■□□□□ 0.49
SLC6A4P31645 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC6A4P31645 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.14■□□□□ 0.49
SLC6A4P31645 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.14■□□□□ 0.49
SLC6A4P31645 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC6A4P31645 AL139288.1-201ENST00000623748 933 ntBASIC18.14■□□□□ 0.49
SLC6A4P31645 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC6A4P31645 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC6A4P31645 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.14■□□□□ 0.49
SLC6A4P31645 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.14■□□□□ 0.49
SLC6A4P31645 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC6A4P31645 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SLC6A4P31645 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.14■□□□□ 0.49
SLC6A4P31645 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SLC6A4P31645 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SLC6A4P31645 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC6A4P31645 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC6A4P31645 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC6A4P31645 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC6A4P31645 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC6A4P31645 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC6A4P31645 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SLC6A4P31645 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC6A4P31645 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SLC6A4P31645 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC6A4P31645 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC6A4P31645 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
SLC6A4P31645 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC6A4P31645 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
SLC6A4P31645 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC6A4P31645 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC6A4P31645 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC6A4P31645 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC6A4P31645 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC6A4P31645 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC6A4P31645 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC6A4P31645 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC6A4P31645 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC6A4P31645 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SLC6A4P31645 SPDYE21P-201ENST00000413323 827 ntBASIC18.13■□□□□ 0.49
SLC6A4P31645 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC6A4P31645 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.13■□□□□ 0.49
SLC6A4P31645 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC6A4P31645 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC6A4P31645 AL049840.3-201ENST00000602669 611 ntBASIC18.13■□□□□ 0.49
SLC6A4P31645 AC025062.2-201ENST00000605477 670 ntBASIC18.13■□□□□ 0.49
SLC6A4P31645 AL773604.1-201ENST00000617417 272 ntBASIC18.13■□□□□ 0.49
SLC6A4P31645 AC073592.4-201ENST00000623827 446 ntBASIC18.13■□□□□ 0.49
SLC6A4P31645 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
SLC6A4P31645 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC6A4P31645 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.13■□□□□ 0.49
SLC6A4P31645 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC6A4P31645 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC6A4P31645 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
SLC6A4P31645 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC6A4P31645 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC6A4P31645 AC008764.6-201ENST00000595909 2069 ntBASIC18.13■□□□□ 0.49
SLC6A4P31645 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC6A4P31645 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC6A4P31645 AC148477.5-201ENST00000625164 1645 ntBASIC18.12■□□□□ 0.49
SLC6A4P31645 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC6A4P31645 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC6A4P31645 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC6A4P31645 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC6A4P31645 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC6A4P31645 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SLC6A4P31645 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SLC6A4P31645 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC6A4P31645 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC6A4P31645 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC6A4P31645 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.12■□□□□ 0.49
SLC6A4P31645 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms