Protein–RNA interactions for Protein: P30260

CDC27, Cell division cycle protein 27 homolog, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27P30260 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDC27P30260 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.52■□□□□ 0.88
CDC27P30260 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDC27P30260 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDC27P30260 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.88
CDC27P30260 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDC27P30260 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDC27P30260 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CDC27P30260 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CDC27P30260 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDC27P30260 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDC27P30260 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.52■□□□□ 0.88
CDC27P30260 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.52■□□□□ 0.88
CDC27P30260 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.52■□□□□ 0.88
CDC27P30260 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.52■□□□□ 0.88
CDC27P30260 AC138894.3-201ENST00000603787 634 ntBASIC20.52■□□□□ 0.88
CDC27P30260 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.52■□□□□ 0.88
CDC27P30260 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDC27P30260 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CDC27P30260 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDC27P30260 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.52■□□□□ 0.88
CDC27P30260 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDC27P30260 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.52■□□□□ 0.88
CDC27P30260 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDC27P30260 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CDC27P30260 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDC27P30260 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDC27P30260 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.51■□□□□ 0.87
CDC27P30260 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.51■□□□□ 0.87
CDC27P30260 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CDC27P30260 FOSL1P1-201ENST00000511041 816 ntBASIC20.51■□□□□ 0.87
CDC27P30260 AC109462.3-201ENST00000573934 613 ntBASIC20.51■□□□□ 0.87
CDC27P30260 AC114341.1-201ENST00000618070 349 ntBASIC20.51■□□□□ 0.87
CDC27P30260 AC012313.10-201ENST00000623509 926 ntBASIC20.51■□□□□ 0.87
CDC27P30260 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.51■□□□□ 0.87
CDC27P30260 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.51■□□□□ 0.87
CDC27P30260 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDC27P30260 LYSMD4-203ENST00000378904 2122 ntBASIC20.51■□□□□ 0.87
CDC27P30260 KRT8P10-201ENST00000450021 1447 ntBASIC20.51■□□□□ 0.87
CDC27P30260 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDC27P30260 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDC27P30260 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.51■□□□□ 0.87
CDC27P30260 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.51■□□□□ 0.87
CDC27P30260 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDC27P30260 AL645608.8-201ENST00000606034 2086 ntBASIC20.5■□□□□ 0.87
CDC27P30260 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDC27P30260 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDC27P30260 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.5■□□□□ 0.87
CDC27P30260 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CDC27P30260 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CDC27P30260 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDC27P30260 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDC27P30260 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CDC27P30260 NUS1P2-201ENST00000417358 873 ntBASIC20.5■□□□□ 0.87
CDC27P30260 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.5■□□□□ 0.87
CDC27P30260 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.5■□□□□ 0.87
CDC27P30260 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.5■□□□□ 0.87
CDC27P30260 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDC27P30260 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.5■□□□□ 0.87
CDC27P30260 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.5■□□□□ 0.87
CDC27P30260 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDC27P30260 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDC27P30260 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDC27P30260 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.5■□□□□ 0.87
CDC27P30260 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDC27P30260 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CDC27P30260 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDC27P30260 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDC27P30260 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDC27P30260 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDC27P30260 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDC27P30260 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDC27P30260 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDC27P30260 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.49■□□□□ 0.87
CDC27P30260 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDC27P30260 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDC27P30260 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDC27P30260 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CDC27P30260 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDC27P30260 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.49■□□□□ 0.87
CDC27P30260 POM121L3P-201ENST00000419331 1163 ntBASIC20.49■□□□□ 0.87
CDC27P30260 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDC27P30260 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.49■□□□□ 0.87
CDC27P30260 AC002558.1-201ENST00000488906 803 ntBASIC20.49■□□□□ 0.87
CDC27P30260 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.49■□□□□ 0.87
CDC27P30260 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.49■□□□□ 0.87
CDC27P30260 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.49■□□□□ 0.87
CDC27P30260 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.49■□□□□ 0.87
CDC27P30260 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CDC27P30260 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDC27P30260 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.49■□□□□ 0.87
CDC27P30260 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.49■□□□□ 0.87
CDC27P30260 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDC27P30260 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDC27P30260 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDC27P30260 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDC27P30260 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDC27P30260 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDC27P30260 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDC27P30260 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms