Protein–RNA interactions for Protein: P27695

APEX1, DNA-(apurinic or apyrimidinic site) lyase, humanhuman

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1P27695 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
APEX1P27695 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
APEX1P27695 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
APEX1P27695 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APEX1P27695 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
APEX1P27695 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
APEX1P27695 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APEX1P27695 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
APEX1P27695 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
APEX1P27695 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.03■□□□□ 0.16
APEX1P27695 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APEX1P27695 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
APEX1P27695 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
APEX1P27695 AC117947.1-201ENST00000427448 529 ntBASIC16.03■□□□□ 0.16
APEX1P27695 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.03■□□□□ 0.16
APEX1P27695 AC022616.7-201ENST00000525383 220 ntBASIC16.03■□□□□ 0.16
APEX1P27695 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.03■□□□□ 0.16
APEX1P27695 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
APEX1P27695 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.03■□□□□ 0.16
APEX1P27695 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.03■□□□□ 0.16
APEX1P27695 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.03■□□□□ 0.16
APEX1P27695 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
APEX1P27695 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
APEX1P27695 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.03■□□□□ 0.16
APEX1P27695 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APEX1P27695 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.03■□□□□ 0.16
APEX1P27695 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APEX1P27695 AL096828.2-201ENST00000567259 1965 ntBASIC16.03■□□□□ 0.16
APEX1P27695 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APEX1P27695 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
APEX1P27695 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
APEX1P27695 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
APEX1P27695 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.03■□□□□ 0.16
APEX1P27695 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APEX1P27695 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
APEX1P27695 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
APEX1P27695 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.03■□□□□ 0.16
APEX1P27695 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
APEX1P27695 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
APEX1P27695 PCDH8P1-201ENST00000428983 2773 ntBASIC16.03■□□□□ 0.16
APEX1P27695 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
APEX1P27695 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
APEX1P27695 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APEX1P27695 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
APEX1P27695 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
APEX1P27695 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
APEX1P27695 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
APEX1P27695 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
APEX1P27695 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
APEX1P27695 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
APEX1P27695 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
APEX1P27695 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.02■□□□□ 0.16
APEX1P27695 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
APEX1P27695 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
APEX1P27695 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.02■□□□□ 0.16
APEX1P27695 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
APEX1P27695 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
APEX1P27695 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.02■□□□□ 0.16
APEX1P27695 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.02■□□□□ 0.16
APEX1P27695 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
APEX1P27695 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
APEX1P27695 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.02■□□□□ 0.16
APEX1P27695 AC092647.4-201ENST00000457211 535 ntBASIC16.02■□□□□ 0.16
APEX1P27695 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.02■□□□□ 0.16
APEX1P27695 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.02■□□□□ 0.16
APEX1P27695 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.02■□□□□ 0.16
APEX1P27695 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.02■□□□□ 0.16
APEX1P27695 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
APEX1P27695 AC009065.1-201ENST00000564055 1225 ntBASIC16.02■□□□□ 0.16
APEX1P27695 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.02■□□□□ 0.16
APEX1P27695 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
APEX1P27695 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
APEX1P27695 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
APEX1P27695 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
APEX1P27695 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
APEX1P27695 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.02■□□□□ 0.15
APEX1P27695 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.02■□□□□ 0.15
APEX1P27695 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.02■□□□□ 0.15
APEX1P27695 AC009102.3-201ENST00000623118 1491 ntBASIC16.02■□□□□ 0.15
APEX1P27695 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
APEX1P27695 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.02■□□□□ 0.15
APEX1P27695 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.02■□□□□ 0.15
APEX1P27695 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
APEX1P27695 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
APEX1P27695 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
APEX1P27695 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
APEX1P27695 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
APEX1P27695 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
APEX1P27695 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
APEX1P27695 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
APEX1P27695 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.01■□□□□ 0.15
APEX1P27695 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
APEX1P27695 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
APEX1P27695 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
APEX1P27695 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
APEX1P27695 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
APEX1P27695 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
APEX1P27695 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.01■□□□□ 0.15
APEX1P27695 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
APEX1P27695 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms