Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN3P26045 AC125634.1-201ENST00000438758 1403 ntBASIC18.06■□□□□ 0.48
PTPN3P26045 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN3P26045 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PTPN3P26045 IER3-202ENST00000376377 1350 ntBASIC18.05■□□□□ 0.48
PTPN3P26045 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN3P26045 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.05■□□□□ 0.48
PTPN3P26045 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN3P26045 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PTPN3P26045 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN3P26045 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN3P26045 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PTPN3P26045 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.05■□□□□ 0.48
PTPN3P26045 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN3P26045 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN3P26045 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN3P26045 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.05■□□□□ 0.48
PTPN3P26045 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.05■□□□□ 0.48
PTPN3P26045 KRT18P35-201ENST00000510488 1269 ntBASIC18.05■□□□□ 0.48
PTPN3P26045 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.05■□□□□ 0.48
PTPN3P26045 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.05■□□□□ 0.48
PTPN3P26045 AC011840.4-201ENST00000578471 627 ntBASIC18.05■□□□□ 0.48
PTPN3P26045 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.05■□□□□ 0.48
PTPN3P26045 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.05■□□□□ 0.48
PTPN3P26045 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.05■□□□□ 0.48
PTPN3P26045 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN3P26045 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
PTPN3P26045 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN3P26045 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN3P26045 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN3P26045 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN3P26045 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN3P26045 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN3P26045 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.05■□□□□ 0.48
PTPN3P26045 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN3P26045 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN3P26045 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PTPN3P26045 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN3P26045 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PTPN3P26045 SIRPAP1-201ENST00000448467 1770 ntBASIC18.04■□□□□ 0.48
PTPN3P26045 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN3P26045 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN3P26045 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
PTPN3P26045 COX5BP2-201ENST00000392354 334 ntBASIC18.04■□□□□ 0.48
PTPN3P26045 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN3P26045 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN3P26045 AC007967.3-201ENST00000434308 558 ntBASIC18.04■□□□□ 0.48
PTPN3P26045 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.04■□□□□ 0.48
PTPN3P26045 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.04■□□□□ 0.48
PTPN3P26045 AC091607.1-201ENST00000490318 1060 ntBASIC18.04■□□□□ 0.48
PTPN3P26045 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.04■□□□□ 0.48
PTPN3P26045 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.04■□□□□ 0.48
PTPN3P26045 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.04■□□□□ 0.48
PTPN3P26045 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.04■□□□□ 0.48
PTPN3P26045 AL138831.2-201ENST00000606564 490 ntBASIC18.04■□□□□ 0.48
PTPN3P26045 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN3P26045 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN3P26045 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN3P26045 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN3P26045 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN3P26045 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.04■□□□□ 0.48
PTPN3P26045 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN3P26045 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN3P26045 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN3P26045 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN3P26045 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.04■□□□□ 0.48
PTPN3P26045 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.03■□□□□ 0.48
PTPN3P26045 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.03■□□□□ 0.48
PTPN3P26045 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN3P26045 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN3P26045 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.03■□□□□ 0.48
PTPN3P26045 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN3P26045 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN3P26045 AC108860.2-201ENST00000562760 2183 ntBASIC18.03■□□□□ 0.48
PTPN3P26045 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN3P26045 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN3P26045 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
PTPN3P26045 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN3P26045 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.03■□□□□ 0.48
PTPN3P26045 AC246785.2-201ENST00000432512 513 ntBASIC18.03■□□□□ 0.48
PTPN3P26045 TSSC2-201ENST00000450217 709 ntBASIC18.03■□□□□ 0.48
PTPN3P26045 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.03■□□□□ 0.48
PTPN3P26045 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.03■□□□□ 0.48
PTPN3P26045 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.03■□□□□ 0.48
PTPN3P26045 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN3P26045 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.03■□□□□ 0.48
PTPN3P26045 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.03■□□□□ 0.48
PTPN3P26045 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN3P26045 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN3P26045 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.03■□□□□ 0.48
PTPN3P26045 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.03■□□□□ 0.48
PTPN3P26045 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
PTPN3P26045 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN3P26045 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN3P26045 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.03■□□□□ 0.48
PTPN3P26045 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN3P26045 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.03■□□□□ 0.48
PTPN3P26045 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN3P26045 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN3P26045 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms