Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.4■□□□□ 0.38
BCKDHBP21953 RHOQP3-201ENST00000437982 621 ntBASIC17.4■□□□□ 0.38
BCKDHBP21953 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BCKDHBP21953 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BCKDHBP21953 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
BCKDHBP21953 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.4■□□□□ 0.38
BCKDHBP21953 AC091812.2-201ENST00000619081 385 ntBASIC17.4■□□□□ 0.38
BCKDHBP21953 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.4■□□□□ 0.38
BCKDHBP21953 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.4■□□□□ 0.38
BCKDHBP21953 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BCKDHBP21953 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BCKDHBP21953 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.4■□□□□ 0.38
BCKDHBP21953 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
BCKDHBP21953 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
BCKDHBP21953 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.4■□□□□ 0.38
BCKDHBP21953 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.4■□□□□ 0.38
BCKDHBP21953 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BCKDHBP21953 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
BCKDHBP21953 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
BCKDHBP21953 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BCKDHBP21953 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.39■□□□□ 0.37
BCKDHBP21953 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BCKDHBP21953 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.39■□□□□ 0.37
BCKDHBP21953 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
BCKDHBP21953 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
BCKDHBP21953 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BCKDHBP21953 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
BCKDHBP21953 AP002414.1-201ENST00000391405 1147 ntBASIC17.39■□□□□ 0.37
BCKDHBP21953 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.39■□□□□ 0.37
BCKDHBP21953 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.39■□□□□ 0.37
BCKDHBP21953 AC074386.1-202ENST00000463561 864 ntBASIC17.39■□□□□ 0.37
BCKDHBP21953 AP000344.2-201ENST00000512987 629 ntBASIC17.39■□□□□ 0.37
BCKDHBP21953 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.39■□□□□ 0.37
BCKDHBP21953 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.39■□□□□ 0.37
BCKDHBP21953 AL353135.1-201ENST00000606729 504 ntBASIC17.39■□□□□ 0.37
BCKDHBP21953 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
BCKDHBP21953 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BCKDHBP21953 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BCKDHBP21953 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
BCKDHBP21953 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
BCKDHBP21953 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BCKDHBP21953 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BCKDHBP21953 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
BCKDHBP21953 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BCKDHBP21953 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BCKDHBP21953 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BCKDHBP21953 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BCKDHBP21953 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
BCKDHBP21953 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
BCKDHBP21953 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
BCKDHBP21953 AC100803.2-201ENST00000562459 1963 ntBASIC17.39■□□□□ 0.37
BCKDHBP21953 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.39■□□□□ 0.37
BCKDHBP21953 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BCKDHBP21953 AC120498.9-201ENST00000339021 3867 ntBASIC17.38■□□□□ 0.37
BCKDHBP21953 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
BCKDHBP21953 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BCKDHBP21953 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BCKDHBP21953 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.38■□□□□ 0.37
BCKDHBP21953 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
BCKDHBP21953 AL035633.1-201ENST00000406139 838 ntBASIC17.38■□□□□ 0.37
BCKDHBP21953 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.38■□□□□ 0.37
BCKDHBP21953 LINC00982-205ENST00000420957 435 ntBASIC17.38■□□□□ 0.37
BCKDHBP21953 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BCKDHBP21953 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.38■□□□□ 0.37
BCKDHBP21953 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.38■□□□□ 0.37
BCKDHBP21953 SPCS2P1-201ENST00000561636 679 ntBASIC17.38■□□□□ 0.37
BCKDHBP21953 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.38■□□□□ 0.37
BCKDHBP21953 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.38■□□□□ 0.37
BCKDHBP21953 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
BCKDHBP21953 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
BCKDHBP21953 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BCKDHBP21953 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BCKDHBP21953 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BCKDHBP21953 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.38■□□□□ 0.37
BCKDHBP21953 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BCKDHBP21953 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.38■□□□□ 0.37
BCKDHBP21953 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.38■□□□□ 0.37
BCKDHBP21953 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BCKDHBP21953 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BCKDHBP21953 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BCKDHBP21953 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
BCKDHBP21953 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
BCKDHBP21953 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
BCKDHBP21953 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.37■□□□□ 0.37
BCKDHBP21953 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BCKDHBP21953 AL096828.2-201ENST00000567259 1965 ntBASIC17.37■□□□□ 0.37
BCKDHBP21953 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BCKDHBP21953 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BCKDHBP21953 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BCKDHBP21953 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BCKDHBP21953 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.37■□□□□ 0.37
BCKDHBP21953 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.37■□□□□ 0.37
BCKDHBP21953 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.37■□□□□ 0.37
BCKDHBP21953 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.37■□□□□ 0.37
BCKDHBP21953 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.37■□□□□ 0.37
BCKDHBP21953 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
BCKDHBP21953 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.37■□□□□ 0.37
BCKDHBP21953 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
BCKDHBP21953 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.37■□□□□ 0.37
BCKDHBP21953 AC092902.6-201ENST00000641783 218 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms