Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.15■□□□□ 0.66
SYN1P17600 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SYN1P17600 AL512638.1-201ENST00000457493 794 ntBASIC19.15■□□□□ 0.66
SYN1P17600 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.15■□□□□ 0.66
SYN1P17600 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC19.15■□□□□ 0.66
SYN1P17600 CR383656.12-201ENST00000549567 513 ntBASIC19.15■□□□□ 0.66
SYN1P17600 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.15■□□□□ 0.66
SYN1P17600 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.15■□□□□ 0.66
SYN1P17600 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SYN1P17600 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SYN1P17600 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYN1P17600 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.15■□□□□ 0.66
SYN1P17600 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYN1P17600 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SYN1P17600 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYN1P17600 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYN1P17600 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SYN1P17600 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SYN1P17600 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYN1P17600 AL161938.1-201ENST00000569833 2180 ntBASIC19.15■□□□□ 0.66
SYN1P17600 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
SYN1P17600 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
SYN1P17600 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SYN1P17600 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SYN1P17600 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SYN1P17600 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SYN1P17600 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SYN1P17600 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYN1P17600 AC007952.6-201ENST00000573168 2673 ntBASIC19.14■□□□□ 0.65
SYN1P17600 AC003957.1-201ENST00000625108 2673 ntBASIC19.14■□□□□ 0.65
SYN1P17600 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYN1P17600 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYN1P17600 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.14■□□□□ 0.65
SYN1P17600 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.14■□□□□ 0.65
SYN1P17600 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
SYN1P17600 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.14■□□□□ 0.65
SYN1P17600 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SYN1P17600 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.14■□□□□ 0.65
SYN1P17600 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.14■□□□□ 0.65
SYN1P17600 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYN1P17600 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYN1P17600 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.14■□□□□ 0.65
SYN1P17600 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.14■□□□□ 0.65
SYN1P17600 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SYN1P17600 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SYN1P17600 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYN1P17600 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYN1P17600 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYN1P17600 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.13■□□□□ 0.65
SYN1P17600 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SYN1P17600 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYN1P17600 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.13■□□□□ 0.65
SYN1P17600 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SYN1P17600 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.13■□□□□ 0.65
SYN1P17600 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.13■□□□□ 0.65
SYN1P17600 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.13■□□□□ 0.65
SYN1P17600 NAA50-208ENST00000497255 789 ntTSL 5 BASIC19.13■□□□□ 0.65
SYN1P17600 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.13■□□□□ 0.65
SYN1P17600 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYN1P17600 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.13■□□□□ 0.65
SYN1P17600 AL358472.5-202ENST00000641448 1267 ntBASIC19.13■□□□□ 0.65
SYN1P17600 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SYN1P17600 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYN1P17600 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.13■□□□□ 0.65
SYN1P17600 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYN1P17600 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYN1P17600 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SYN1P17600 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SYN1P17600 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.12■□□□□ 0.65
SYN1P17600 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.12■□□□□ 0.65
SYN1P17600 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.12■□□□□ 0.65
SYN1P17600 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SYN1P17600 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SYN1P17600 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.12■□□□□ 0.65
SYN1P17600 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SYN1P17600 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SYN1P17600 AC002056.1-201ENST00000395613 760 ntBASIC19.12■□□□□ 0.65
SYN1P17600 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SYN1P17600 LINC00982-205ENST00000420957 435 ntBASIC19.12■□□□□ 0.65
SYN1P17600 NME2P1-201ENST00000426182 414 ntBASIC19.12■□□□□ 0.65
SYN1P17600 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.12■□□□□ 0.65
SYN1P17600 ATP5G2P4-201ENST00000442175 420 ntBASIC19.12■□□□□ 0.65
SYN1P17600 AC079140.1-201ENST00000508039 487 ntBASIC19.12■□□□□ 0.65
SYN1P17600 AL512356.2-201ENST00000546955 174 ntBASIC19.12■□□□□ 0.65
SYN1P17600 AL596325.1-201ENST00000563991 1082 ntBASIC19.12■□□□□ 0.65
SYN1P17600 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.12■□□□□ 0.65
SYN1P17600 AC027307.3-201ENST00000594262 1100 ntBASIC19.12■□□□□ 0.65
SYN1P17600 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.12■□□□□ 0.65
SYN1P17600 AC025048.6-201ENST00000634326 1161 ntBASIC19.12■□□□□ 0.65
SYN1P17600 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SYN1P17600 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SYN1P17600 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SYN1P17600 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
SYN1P17600 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SYN1P17600 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.11■□□□□ 0.65
SYN1P17600 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SYN1P17600 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.11■□□□□ 0.65
SYN1P17600 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SYN1P17600 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.11■□□□□ 0.65
SYN1P17600 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms