Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
H2AFXP16104 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
H2AFXP16104 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC18.39■□□□□ 0.53
H2AFXP16104 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
H2AFXP16104 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
H2AFXP16104 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.39■□□□□ 0.53
H2AFXP16104 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
H2AFXP16104 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
H2AFXP16104 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
H2AFXP16104 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
H2AFXP16104 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.39■□□□□ 0.53
H2AFXP16104 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
H2AFXP16104 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2AFXP16104 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
H2AFXP16104 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
H2AFXP16104 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
H2AFXP16104 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
H2AFXP16104 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2AFXP16104 C1R-202ENST00000536053 2347 ntTSL 2 BASIC18.38■□□□□ 0.53
H2AFXP16104 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2AFXP16104 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2AFXP16104 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
H2AFXP16104 AC008687.6-201ENST00000596318 630 ntBASIC18.38■□□□□ 0.53
H2AFXP16104 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.38■□□□□ 0.53
H2AFXP16104 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2AFXP16104 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2AFXP16104 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
H2AFXP16104 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2AFXP16104 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
H2AFXP16104 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
H2AFXP16104 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2AFXP16104 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2AFXP16104 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2AFXP16104 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.38■□□□□ 0.53
H2AFXP16104 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2AFXP16104 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
H2AFXP16104 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
H2AFXP16104 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2AFXP16104 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2AFXP16104 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
H2AFXP16104 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.37■□□□□ 0.53
H2AFXP16104 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2AFXP16104 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
H2AFXP16104 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2AFXP16104 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
H2AFXP16104 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2AFXP16104 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2AFXP16104 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2AFXP16104 AC004980.1-204ENST00000429707 299 ntBASIC18.37■□□□□ 0.53
H2AFXP16104 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
H2AFXP16104 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.37■□□□□ 0.53
H2AFXP16104 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.37■□□□□ 0.53
H2AFXP16104 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.37■□□□□ 0.53
H2AFXP16104 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.37■□□□□ 0.53
H2AFXP16104 AC004264.1-201ENST00000608354 794 ntBASIC18.37■□□□□ 0.53
H2AFXP16104 AL445675.2-201ENST00000620291 557 ntBASIC18.37■□□□□ 0.53
H2AFXP16104 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.37■□□□□ 0.53
H2AFXP16104 LINC01311-201ENST00000565162 1445 ntBASIC18.37■□□□□ 0.53
H2AFXP16104 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
H2AFXP16104 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.37■□□□□ 0.53
H2AFXP16104 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2AFXP16104 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2AFXP16104 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
H2AFXP16104 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
H2AFXP16104 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2AFXP16104 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
H2AFXP16104 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2AFXP16104 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
H2AFXP16104 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
H2AFXP16104 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
H2AFXP16104 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
H2AFXP16104 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
H2AFXP16104 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
H2AFXP16104 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
H2AFXP16104 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
H2AFXP16104 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
H2AFXP16104 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.36■□□□□ 0.53
H2AFXP16104 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
H2AFXP16104 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
H2AFXP16104 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
H2AFXP16104 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
H2AFXP16104 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
H2AFXP16104 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
H2AFXP16104 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.36■□□□□ 0.53
H2AFXP16104 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.36■□□□□ 0.53
H2AFXP16104 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.36■□□□□ 0.53
H2AFXP16104 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.36■□□□□ 0.53
H2AFXP16104 DDX43P3-201ENST00000441064 443 ntBASIC18.36■□□□□ 0.53
H2AFXP16104 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.36■□□□□ 0.53
H2AFXP16104 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.36■□□□□ 0.53
H2AFXP16104 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.36■□□□□ 0.53
H2AFXP16104 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.36■□□□□ 0.53
H2AFXP16104 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
H2AFXP16104 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.36■□□□□ 0.53
H2AFXP16104 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.36■□□□□ 0.53
H2AFXP16104 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.36■□□□□ 0.53
H2AFXP16104 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.36■□□□□ 0.53
H2AFXP16104 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
H2AFXP16104 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.36■□□□□ 0.53
H2AFXP16104 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms