Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.43■□□□□ 0.7
ITGA4P13612 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.43■□□□□ 0.7
ITGA4P13612 AL355877.3-201ENST00000622820 899 ntBASIC19.43■□□□□ 0.7
ITGA4P13612 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
ITGA4P13612 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ITGA4P13612 HLA-A-201ENST00000376802 1334 ntBASIC19.43■□□□□ 0.7
ITGA4P13612 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.43■□□□□ 0.7
ITGA4P13612 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ITGA4P13612 AC093010.1-201ENST00000473625 1624 ntBASIC19.43■□□□□ 0.7
ITGA4P13612 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ITGA4P13612 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ITGA4P13612 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.43■□□□□ 0.7
ITGA4P13612 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ITGA4P13612 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
ITGA4P13612 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.42■□□□□ 0.7
ITGA4P13612 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ITGA4P13612 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ITGA4P13612 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.42■□□□□ 0.7
ITGA4P13612 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ITGA4P13612 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ITGA4P13612 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
ITGA4P13612 LINC00896-202ENST00000609602 2128 ntBASIC19.42■□□□□ 0.7
ITGA4P13612 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
ITGA4P13612 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ITGA4P13612 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.42■□□□□ 0.7
ITGA4P13612 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ITGA4P13612 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.42■□□□□ 0.7
ITGA4P13612 RBM17P3-201ENST00000417687 1192 ntBASIC19.42■□□□□ 0.7
ITGA4P13612 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.42■□□□□ 0.7
ITGA4P13612 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ITGA4P13612 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.42■□□□□ 0.7
ITGA4P13612 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.42■□□□□ 0.7
ITGA4P13612 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.42■□□□□ 0.7
ITGA4P13612 MTDHP3-201ENST00000594186 672 ntBASIC19.42■□□□□ 0.7
ITGA4P13612 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ITGA4P13612 AP001269.4-201ENST00000609611 512 ntBASIC19.42■□□□□ 0.7
ITGA4P13612 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ITGA4P13612 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ITGA4P13612 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ITGA4P13612 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.42■□□□□ 0.7
ITGA4P13612 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.42■□□□□ 0.7
ITGA4P13612 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ITGA4P13612 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ITGA4P13612 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ITGA4P13612 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.42■□□□□ 0.7
ITGA4P13612 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ITGA4P13612 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ITGA4P13612 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ITGA4P13612 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ITGA4P13612 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ITGA4P13612 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.41■□□□□ 0.7
ITGA4P13612 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ITGA4P13612 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ITGA4P13612 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ITGA4P13612 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
ITGA4P13612 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ITGA4P13612 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ITGA4P13612 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ITGA4P13612 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ITGA4P13612 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ITGA4P13612 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ITGA4P13612 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ITGA4P13612 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ITGA4P13612 AP000347.1-202ENST00000435868 847 ntBASIC19.41■□□□□ 0.7
ITGA4P13612 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.41■□□□□ 0.7
ITGA4P13612 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.41■□□□□ 0.7
ITGA4P13612 AF186996.4-201ENST00000467186 377 ntBASIC19.41■□□□□ 0.7
ITGA4P13612 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.41■□□□□ 0.7
ITGA4P13612 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.41■□□□□ 0.7
ITGA4P13612 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
ITGA4P13612 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ITGA4P13612 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.41■□□□□ 0.7
ITGA4P13612 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ITGA4P13612 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ITGA4P13612 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ITGA4P13612 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ITGA4P13612 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
ITGA4P13612 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ITGA4P13612 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ITGA4P13612 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ITGA4P13612 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
ITGA4P13612 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.41■□□□□ 0.7
ITGA4P13612 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ITGA4P13612 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ITGA4P13612 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.41■□□□□ 0.7
ITGA4P13612 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.4■□□□□ 0.7
ITGA4P13612 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.4■□□□□ 0.7
ITGA4P13612 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ITGA4P13612 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ITGA4P13612 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.4■□□□□ 0.7
ITGA4P13612 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.4■□□□□ 0.7
ITGA4P13612 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ITGA4P13612 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ITGA4P13612 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ITGA4P13612 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ITGA4P13612 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ITGA4P13612 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
ITGA4P13612 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ITGA4P13612 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.4■□□□□ 0.7
ITGA4P13612 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms