Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AC005829.1-201ENST00000570002 483 ntBASIC19.4■□□□□ 0.7
HOXD8P13378 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXD8P13378 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD8P13378 C20orf181-201ENST00000623918 480 ntBASIC19.4■□□□□ 0.7
HOXD8P13378 AC010507.1-201ENST00000633895 436 ntBASIC19.4■□□□□ 0.7
HOXD8P13378 AC079781.4-201ENST00000641908 219 ntBASIC19.4■□□□□ 0.7
HOXD8P13378 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD8P13378 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD8P13378 AL590787.1-201ENST00000568856 1315 ntBASIC19.4■□□□□ 0.7
HOXD8P13378 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
HOXD8P13378 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXD8P13378 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD8P13378 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HOXD8P13378 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD8P13378 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HOXD8P13378 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.39■□□□□ 0.7
HOXD8P13378 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.39■□□□□ 0.7
HOXD8P13378 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.39■□□□□ 0.7
HOXD8P13378 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
HOXD8P13378 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.39■□□□□ 0.69
HOXD8P13378 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXD8P13378 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.39■□□□□ 0.69
HOXD8P13378 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXD8P13378 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXD8P13378 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXD8P13378 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXD8P13378 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
HOXD8P13378 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
HOXD8P13378 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
HOXD8P13378 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.39■□□□□ 0.69
HOXD8P13378 DNAJB3-202ENST00000449667 1266 ntBASIC19.39■□□□□ 0.69
HOXD8P13378 ALG1L5P-201ENST00000482043 771 ntBASIC19.39■□□□□ 0.69
HOXD8P13378 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXD8P13378 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.39■□□□□ 0.69
HOXD8P13378 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
HOXD8P13378 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
HOXD8P13378 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.39■□□□□ 0.69
HOXD8P13378 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
HOXD8P13378 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXD8P13378 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.39■□□□□ 0.69
HOXD8P13378 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXD8P13378 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXD8P13378 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXD8P13378 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.39■□□□□ 0.69
HOXD8P13378 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
HOXD8P13378 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
HOXD8P13378 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
HOXD8P13378 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXD8P13378 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXD8P13378 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXD8P13378 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXD8P13378 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXD8P13378 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.38■□□□□ 0.69
HOXD8P13378 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXD8P13378 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXD8P13378 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
HOXD8P13378 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.38■□□□□ 0.69
HOXD8P13378 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HOXD8P13378 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXD8P13378 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HOXD8P13378 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HOXD8P13378 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HOXD8P13378 AC211486.1-202ENST00000416371 468 ntBASIC19.38■□□□□ 0.69
HOXD8P13378 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.38■□□□□ 0.69
HOXD8P13378 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.38■□□□□ 0.69
HOXD8P13378 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HOXD8P13378 MKNK2P1-201ENST00000437526 628 ntBASIC19.38■□□□□ 0.69
HOXD8P13378 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.38■□□□□ 0.69
HOXD8P13378 AC211476.1-201ENST00000503899 468 ntBASIC19.38■□□□□ 0.69
HOXD8P13378 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.38■□□□□ 0.69
HOXD8P13378 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
HOXD8P13378 AC138028.4-201ENST00000564984 1845 ntBASIC19.38■□□□□ 0.69
HOXD8P13378 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.38■□□□□ 0.69
HOXD8P13378 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HOXD8P13378 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.38■□□□□ 0.69
HOXD8P13378 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXD8P13378 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXD8P13378 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXD8P13378 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HOXD8P13378 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.37■□□□□ 0.69
HOXD8P13378 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
HOXD8P13378 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXD8P13378 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXD8P13378 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.37■□□□□ 0.69
HOXD8P13378 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.37■□□□□ 0.69
HOXD8P13378 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HOXD8P13378 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HOXD8P13378 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HOXD8P13378 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HOXD8P13378 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
HOXD8P13378 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXD8P13378 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
HOXD8P13378 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.37■□□□□ 0.69
HOXD8P13378 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.37■□□□□ 0.69
HOXD8P13378 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.37■□□□□ 0.69
HOXD8P13378 PDPK2P-202ENST00000562415 1191 ntBASIC19.37■□□□□ 0.69
HOXD8P13378 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXD8P13378 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
HOXD8P13378 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXD8P13378 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms