Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.28■□□□□ 0.36
CDH1P12830 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.28■□□□□ 0.36
CDH1P12830 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDH1P12830 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CDH1P12830 AP000550.4-202ENST00000639755 178 ntBASIC17.28■□□□□ 0.36
CDH1P12830 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.28■□□□□ 0.36
CDH1P12830 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.28■□□□□ 0.36
CDH1P12830 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH1P12830 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.28■□□□□ 0.36
CDH1P12830 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.28■□□□□ 0.36
CDH1P12830 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH1P12830 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.28■□□□□ 0.36
CDH1P12830 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CDH1P12830 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH1P12830 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH1P12830 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH1P12830 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CDH1P12830 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH1P12830 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
CDH1P12830 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.28■□□□□ 0.36
CDH1P12830 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH1P12830 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
CDH1P12830 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.28■□□□□ 0.36
CDH1P12830 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH1P12830 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDH1P12830 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CDH1P12830 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDH1P12830 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.27■□□□□ 0.36
CDH1P12830 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDH1P12830 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH1P12830 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDH1P12830 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDH1P12830 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH1P12830 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDH1P12830 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDH1P12830 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH1P12830 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CDH1P12830 MTCL1P1-201ENST00000446207 792 ntBASIC17.27■□□□□ 0.36
CDH1P12830 BX276092.5-203ENST00000456199 560 ntBASIC17.27■□□□□ 0.36
CDH1P12830 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.27■□□□□ 0.36
CDH1P12830 AC068472.1-201ENST00000474589 881 ntBASIC17.27■□□□□ 0.36
CDH1P12830 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.27■□□□□ 0.36
CDH1P12830 GUSBP12-201ENST00000513727 720 ntBASIC17.27■□□□□ 0.36
CDH1P12830 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.27■□□□□ 0.36
CDH1P12830 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH1P12830 AL121672.3-201ENST00000608644 468 ntBASIC17.27■□□□□ 0.36
CDH1P12830 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CDH1P12830 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDH1P12830 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDH1P12830 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDH1P12830 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.35
CDH1P12830 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDH1P12830 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.27■□□□□ 0.35
CDH1P12830 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDH1P12830 AC080080.1-201ENST00000625121 2420 ntBASIC17.27■□□□□ 0.35
CDH1P12830 KRT8P47-201ENST00000604727 1398 ntBASIC17.27■□□□□ 0.35
CDH1P12830 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.35
CDH1P12830 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.27■□□□□ 0.35
CDH1P12830 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH1P12830 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CDH1P12830 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CDH1P12830 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH1P12830 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH1P12830 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDH1P12830 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.26■□□□□ 0.35
CDH1P12830 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH1P12830 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH1P12830 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.26■□□□□ 0.35
CDH1P12830 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH1P12830 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.26■□□□□ 0.35
CDH1P12830 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH1P12830 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.26■□□□□ 0.35
CDH1P12830 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDH1P12830 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH1P12830 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
CDH1P12830 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.26■□□□□ 0.35
CDH1P12830 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.26■□□□□ 0.35
CDH1P12830 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.26■□□□□ 0.35
CDH1P12830 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.26■□□□□ 0.35
CDH1P12830 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CDH1P12830 AL592071.1-201ENST00000611956 408 ntBASIC17.26■□□□□ 0.35
CDH1P12830 IGHV3-41-201ENST00000613121 348 ntBASIC17.26■□□□□ 0.35
CDH1P12830 AC124864.1-201ENST00000623408 392 ntBASIC17.26■□□□□ 0.35
CDH1P12830 AL139384.1-201ENST00000612143 3047 ntBASIC17.26■□□□□ 0.35
CDH1P12830 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.26■□□□□ 0.35
CDH1P12830 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH1P12830 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDH1P12830 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH1P12830 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
CDH1P12830 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH1P12830 AC016734.2-201ENST00000624325 1377 ntBASIC17.26■□□□□ 0.35
CDH1P12830 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.26■□□□□ 0.35
CDH1P12830 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH1P12830 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH1P12830 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH1P12830 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.26■□□□□ 0.35
CDH1P12830 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
CDH1P12830 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.25■□□□□ 0.35
CDH1P12830 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH1P12830 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms