Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 AC008677.1-201ENST00000519230 1561 ntBASIC17.3■□□□□ 0.36
SP9P0CG40 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SP9P0CG40 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SP9P0CG40 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SP9P0CG40 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SP9P0CG40 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SP9P0CG40 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.29■□□□□ 0.36
SP9P0CG40 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SP9P0CG40 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SP9P0CG40 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SP9P0CG40 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SP9P0CG40 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SP9P0CG40 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SP9P0CG40 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SP9P0CG40 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SP9P0CG40 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.29■□□□□ 0.36
SP9P0CG40 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.29■□□□□ 0.36
SP9P0CG40 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.29■□□□□ 0.36
SP9P0CG40 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.29■□□□□ 0.36
SP9P0CG40 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.29■□□□□ 0.36
SP9P0CG40 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.29■□□□□ 0.36
SP9P0CG40 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SP9P0CG40 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.29■□□□□ 0.36
SP9P0CG40 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.29■□□□□ 0.36
SP9P0CG40 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.29■□□□□ 0.36
SP9P0CG40 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.29■□□□□ 0.36
SP9P0CG40 AL662799.1-202ENST00000614205 422 ntBASIC17.29■□□□□ 0.36
SP9P0CG40 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.29■□□□□ 0.36
SP9P0CG40 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SP9P0CG40 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SP9P0CG40 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SP9P0CG40 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SP9P0CG40 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.29■□□□□ 0.36
SP9P0CG40 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SP9P0CG40 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SP9P0CG40 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.29■□□□□ 0.36
SP9P0CG40 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
SP9P0CG40 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.29■□□□□ 0.36
SP9P0CG40 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SP9P0CG40 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SP9P0CG40 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SP9P0CG40 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SP9P0CG40 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.28■□□□□ 0.36
SP9P0CG40 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SP9P0CG40 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SP9P0CG40 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SP9P0CG40 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SP9P0CG40 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SP9P0CG40 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SP9P0CG40 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SP9P0CG40 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SP9P0CG40 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.28■□□□□ 0.36
SP9P0CG40 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
SP9P0CG40 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.28■□□□□ 0.36
SP9P0CG40 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.28■□□□□ 0.36
SP9P0CG40 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.28■□□□□ 0.36
SP9P0CG40 AL135744.1-201ENST00000565098 629 ntBASIC17.28■□□□□ 0.36
SP9P0CG40 SPDYE22P-201ENST00000582158 798 ntBASIC17.28■□□□□ 0.36
SP9P0CG40 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.28■□□□□ 0.36
SP9P0CG40 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SP9P0CG40 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SP9P0CG40 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SP9P0CG40 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.28■□□□□ 0.36
SP9P0CG40 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SP9P0CG40 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SP9P0CG40 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SP9P0CG40 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SP9P0CG40 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SP9P0CG40 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SP9P0CG40 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.28■□□□□ 0.36
SP9P0CG40 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SP9P0CG40 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SP9P0CG40 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.27■□□□□ 0.36
SP9P0CG40 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SP9P0CG40 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SP9P0CG40 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SP9P0CG40 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SP9P0CG40 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SP9P0CG40 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SP9P0CG40 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SP9P0CG40 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SP9P0CG40 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.27■□□□□ 0.36
SP9P0CG40 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SP9P0CG40 COX5BP8-201ENST00000416911 349 ntBASIC17.27■□□□□ 0.36
SP9P0CG40 ATP5G2P4-201ENST00000442175 420 ntBASIC17.27■□□□□ 0.36
SP9P0CG40 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.27■□□□□ 0.36
SP9P0CG40 AC097493.3-201ENST00000509725 367 ntBASIC17.27■□□□□ 0.36
SP9P0CG40 SERBP1P5-201ENST00000510079 1181 ntBASIC17.27■□□□□ 0.36
SP9P0CG40 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SP9P0CG40 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.27■□□□□ 0.36
SP9P0CG40 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.27■□□□□ 0.36
SP9P0CG40 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.27■□□□□ 0.36
SP9P0CG40 AC026150.2-201ENST00000564693 1156 ntBASIC17.27■□□□□ 0.36
SP9P0CG40 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SP9P0CG40 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SP9P0CG40 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SP9P0CG40 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.27■□□□□ 0.35
SP9P0CG40 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.27■□□□□ 0.35
SP9P0CG40 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SP9P0CG40 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms