Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RETP07949 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RETP07949 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
RETP07949 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.84■□□□□ 0.45
RETP07949 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RETP07949 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RETP07949 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RETP07949 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RETP07949 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RETP07949 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.84■□□□□ 0.45
RETP07949 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.84■□□□□ 0.45
RETP07949 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.84■□□□□ 0.45
RETP07949 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.84■□□□□ 0.45
RETP07949 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.84■□□□□ 0.45
RETP07949 KRT18P41-201ENST00000518924 1277 ntBASIC17.84■□□□□ 0.45
RETP07949 AP002472.1-201ENST00000577490 586 ntBASIC17.84■□□□□ 0.45
RETP07949 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.84■□□□□ 0.45
RETP07949 AC005593.1-201ENST00000624894 515 ntBASIC17.84■□□□□ 0.45
RETP07949 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RETP07949 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RETP07949 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RETP07949 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RETP07949 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RETP07949 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.84■□□□□ 0.45
RETP07949 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RETP07949 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RETP07949 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RETP07949 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.84■□□□□ 0.45
RETP07949 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RETP07949 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RETP07949 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RETP07949 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
RETP07949 AC068880.1-201ENST00000507289 2297 ntBASIC17.83■□□□□ 0.45
RETP07949 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.83■□□□□ 0.45
RETP07949 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RETP07949 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RETP07949 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.83■□□□□ 0.45
RETP07949 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.83■□□□□ 0.45
RETP07949 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RETP07949 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.83■□□□□ 0.45
RETP07949 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RETP07949 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.83■□□□□ 0.45
RETP07949 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RETP07949 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RETP07949 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RETP07949 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RETP07949 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RETP07949 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RETP07949 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RETP07949 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RETP07949 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
RETP07949 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.83■□□□□ 0.44
RETP07949 CNN2P11-201ENST00000429351 262 ntBASIC17.83■□□□□ 0.44
RETP07949 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RETP07949 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.83■□□□□ 0.44
RETP07949 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RETP07949 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.83■□□□□ 0.44
RETP07949 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.83■□□□□ 0.44
RETP07949 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.83■□□□□ 0.44
RETP07949 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
RETP07949 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RETP07949 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.83■□□□□ 0.44
RETP07949 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.83■□□□□ 0.44
RETP07949 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RETP07949 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RETP07949 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
RETP07949 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RETP07949 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
RETP07949 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.83■□□□□ 0.44
RETP07949 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.83■□□□□ 0.44
RETP07949 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RETP07949 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.83■□□□□ 0.44
RETP07949 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RETP07949 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RETP07949 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.82■□□□□ 0.44
RETP07949 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RETP07949 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RETP07949 AC002310.6-201ENST00000624451 1377 ntBASIC17.82■□□□□ 0.44
RETP07949 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RETP07949 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RETP07949 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.82■□□□□ 0.44
RETP07949 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RETP07949 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RETP07949 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RETP07949 MIR149-201ENST00000384879 89 ntBASIC17.82■□□□□ 0.44
RETP07949 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RETP07949 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.82■□□□□ 0.44
RETP07949 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.82■□□□□ 0.44
RETP07949 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.82■□□□□ 0.44
RETP07949 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.82■□□□□ 0.44
RETP07949 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RETP07949 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.82■□□□□ 0.44
RETP07949 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RETP07949 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RETP07949 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RETP07949 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RETP07949 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RETP07949 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RETP07949 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RETP07949 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms