Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CAPN1P07384 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CAPN1P07384 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
CAPN1P07384 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.46■□□□□ 0.38
CAPN1P07384 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.38
CAPN1P07384 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.45■□□□□ 0.38
CAPN1P07384 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CAPN1P07384 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CAPN1P07384 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.45■□□□□ 0.38
CAPN1P07384 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CAPN1P07384 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CAPN1P07384 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CAPN1P07384 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CAPN1P07384 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CAPN1P07384 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CAPN1P07384 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CAPN1P07384 PVRIG2P-201ENST00000435460 978 ntBASIC17.45■□□□□ 0.38
CAPN1P07384 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.45■□□□□ 0.38
CAPN1P07384 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.45■□□□□ 0.38
CAPN1P07384 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CAPN1P07384 KRT8P26-201ENST00000534154 1276 ntBASIC17.45■□□□□ 0.38
CAPN1P07384 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.45■□□□□ 0.38
CAPN1P07384 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.45■□□□□ 0.38
CAPN1P07384 AC008687.5-201ENST00000593746 558 ntBASIC17.45■□□□□ 0.38
CAPN1P07384 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CAPN1P07384 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CAPN1P07384 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CAPN1P07384 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CAPN1P07384 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.45■□□□□ 0.38
CAPN1P07384 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.45■□□□□ 0.38
CAPN1P07384 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CAPN1P07384 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CAPN1P07384 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CAPN1P07384 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CAPN1P07384 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CAPN1P07384 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CAPN1P07384 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN1P07384 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.44■□□□□ 0.38
CAPN1P07384 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CAPN1P07384 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN1P07384 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.44■□□□□ 0.38
CAPN1P07384 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
CAPN1P07384 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.44■□□□□ 0.38
CAPN1P07384 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN1P07384 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.44■□□□□ 0.38
CAPN1P07384 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN1P07384 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CAPN1P07384 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN1P07384 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN1P07384 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.44■□□□□ 0.38
CAPN1P07384 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN1P07384 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN1P07384 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN1P07384 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN1P07384 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN1P07384 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.44■□□□□ 0.38
CAPN1P07384 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.44■□□□□ 0.38
CAPN1P07384 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.44■□□□□ 0.38
CAPN1P07384 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
CAPN1P07384 AC092329.2-201ENST00000598402 547 ntBASIC17.44■□□□□ 0.38
CAPN1P07384 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN1P07384 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.44■□□□□ 0.38
CAPN1P07384 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CAPN1P07384 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.44■□□□□ 0.38
CAPN1P07384 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.44■□□□□ 0.38
CAPN1P07384 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN1P07384 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN1P07384 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN1P07384 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN1P07384 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
CAPN1P07384 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN1P07384 LINC00167-201ENST00000530583 1419 ntBASIC17.44■□□□□ 0.38
CAPN1P07384 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.44■□□□□ 0.38
CAPN1P07384 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.44■□□□□ 0.38
CAPN1P07384 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN1P07384 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CAPN1P07384 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.44■□□□□ 0.38
CAPN1P07384 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
CAPN1P07384 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN1P07384 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.44■□□□□ 0.38
CAPN1P07384 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN1P07384 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CAPN1P07384 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CAPN1P07384 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CAPN1P07384 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CAPN1P07384 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CAPN1P07384 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.43■□□□□ 0.38
CAPN1P07384 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.43■□□□□ 0.38
CAPN1P07384 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CAPN1P07384 PP12613-201ENST00000424958 2230 ntBASIC17.43■□□□□ 0.38
CAPN1P07384 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CAPN1P07384 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CAPN1P07384 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CAPN1P07384 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CAPN1P07384 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CAPN1P07384 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CAPN1P07384 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
CAPN1P07384 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CAPN1P07384 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CAPN1P07384 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms