Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RB1P06400 BX323043.1-201ENST00000641006 1765 ntBASIC18.62■□□□□ 0.57
RB1P06400 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.62■□□□□ 0.57
RB1P06400 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RB1P06400 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RB1P06400 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.62■□□□□ 0.57
RB1P06400 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RB1P06400 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.62■□□□□ 0.57
RB1P06400 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.62■□□□□ 0.57
RB1P06400 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RB1P06400 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RB1P06400 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RB1P06400 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RB1P06400 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RB1P06400 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RB1P06400 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RB1P06400 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RB1P06400 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RB1P06400 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
RB1P06400 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RB1P06400 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RB1P06400 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RB1P06400 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RB1P06400 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RB1P06400 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.61■□□□□ 0.57
RB1P06400 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.61■□□□□ 0.57
RB1P06400 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RB1P06400 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.61■□□□□ 0.57
RB1P06400 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
RB1P06400 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.61■□□□□ 0.57
RB1P06400 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.61■□□□□ 0.57
RB1P06400 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RB1P06400 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RB1P06400 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.61■□□□□ 0.57
RB1P06400 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.61■□□□□ 0.57
RB1P06400 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RB1P06400 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RB1P06400 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RB1P06400 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
RB1P06400 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RB1P06400 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RB1P06400 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RB1P06400 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RB1P06400 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RB1P06400 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RB1P06400 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RB1P06400 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RB1P06400 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
RB1P06400 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RB1P06400 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RB1P06400 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
RB1P06400 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RB1P06400 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.6■□□□□ 0.57
RB1P06400 PAWRP1-201ENST00000451083 565 ntBASIC18.6■□□□□ 0.57
RB1P06400 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RB1P06400 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.6■□□□□ 0.57
RB1P06400 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
RB1P06400 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
RB1P06400 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.6■□□□□ 0.57
RB1P06400 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.6■□□□□ 0.57
RB1P06400 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RB1P06400 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RB1P06400 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RB1P06400 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.6■□□□□ 0.57
RB1P06400 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.6■□□□□ 0.57
RB1P06400 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RB1P06400 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RB1P06400 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RB1P06400 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.6■□□□□ 0.57
RB1P06400 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RB1P06400 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.6■□□□□ 0.57
RB1P06400 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.59■□□□□ 0.57
RB1P06400 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RB1P06400 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.59■□□□□ 0.57
RB1P06400 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.59■□□□□ 0.57
RB1P06400 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RB1P06400 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RB1P06400 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RB1P06400 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RB1P06400 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.59■□□□□ 0.57
RB1P06400 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.59■□□□□ 0.57
RB1P06400 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.59■□□□□ 0.57
RB1P06400 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RB1P06400 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
RB1P06400 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.59■□□□□ 0.57
RB1P06400 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RB1P06400 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.59■□□□□ 0.57
RB1P06400 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.59■□□□□ 0.57
RB1P06400 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RB1P06400 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RB1P06400 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
RB1P06400 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.59■□□□□ 0.57
RB1P06400 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.59■□□□□ 0.57
RB1P06400 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RB1P06400 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RB1P06400 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
RB1P06400 PI4KAP1-204ENST00000612579 1703 ntBASIC18.59■□□□□ 0.57
RB1P06400 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.59■□□□□ 0.57
RB1P06400 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.59■□□□□ 0.57
RB1P06400 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms