Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.16■□□□□ 0.98
POLR3DP05423 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
POLR3DP05423 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
POLR3DP05423 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
POLR3DP05423 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
POLR3DP05423 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC21.15■□□□□ 0.98
POLR3DP05423 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
POLR3DP05423 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
POLR3DP05423 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
POLR3DP05423 AC010460.3-201ENST00000511359 1579 ntBASIC21.15■□□□□ 0.98
POLR3DP05423 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC21.15■□□□□ 0.98
POLR3DP05423 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
POLR3DP05423 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
POLR3DP05423 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
POLR3DP05423 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC21.15■□□□□ 0.98
POLR3DP05423 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
POLR3DP05423 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC21.15■□□□□ 0.98
POLR3DP05423 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
POLR3DP05423 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC21.15■□□□□ 0.98
POLR3DP05423 CTNS-203ENST00000399306 803 ntTSL 3 BASIC21.15■□□□□ 0.98
POLR3DP05423 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC21.15■□□□□ 0.98
POLR3DP05423 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC21.15■□□□□ 0.98
POLR3DP05423 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC21.15■□□□□ 0.98
POLR3DP05423 PENK-208ENST00000523051 772 ntTSL 5 BASIC21.15■□□□□ 0.98
POLR3DP05423 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC21.15■□□□□ 0.98
POLR3DP05423 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC21.15■□□□□ 0.98
POLR3DP05423 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
POLR3DP05423 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
POLR3DP05423 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
POLR3DP05423 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
POLR3DP05423 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
POLR3DP05423 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.15■□□□□ 0.98
POLR3DP05423 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
POLR3DP05423 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
POLR3DP05423 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
POLR3DP05423 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
POLR3DP05423 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.14■□□□□ 0.98
POLR3DP05423 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.14■□□□□ 0.98
POLR3DP05423 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
POLR3DP05423 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
POLR3DP05423 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
POLR3DP05423 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
POLR3DP05423 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC21.14■□□□□ 0.97
POLR3DP05423 MED22-202ENST00000371999 987 ntTSL 3 BASIC21.14■□□□□ 0.97
POLR3DP05423 KRT18P67-201ENST00000432816 1264 ntBASIC21.14■□□□□ 0.97
POLR3DP05423 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
POLR3DP05423 PPIE-208ENST00000470213 927 ntTSL 3 BASIC21.14■□□□□ 0.97
POLR3DP05423 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
POLR3DP05423 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.97
POLR3DP05423 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC21.14■□□□□ 0.97
POLR3DP05423 AL773604.1-201ENST00000617417 272 ntBASIC21.14■□□□□ 0.97
POLR3DP05423 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
POLR3DP05423 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
POLR3DP05423 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
POLR3DP05423 HTR7P1-202ENST00000624664 4411 ntBASIC21.14■□□□□ 0.97
POLR3DP05423 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
POLR3DP05423 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC21.14■□□□□ 0.97
POLR3DP05423 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
POLR3DP05423 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
POLR3DP05423 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
POLR3DP05423 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
POLR3DP05423 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
POLR3DP05423 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
POLR3DP05423 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
POLR3DP05423 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
POLR3DP05423 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
POLR3DP05423 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
POLR3DP05423 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
POLR3DP05423 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
POLR3DP05423 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
POLR3DP05423 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
POLR3DP05423 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
POLR3DP05423 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC21.13■□□□□ 0.97
POLR3DP05423 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC21.13■□□□□ 0.97
POLR3DP05423 SCARNA2-201ENST00000458748 420 ntBASIC21.13■□□□□ 0.97
POLR3DP05423 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC21.13■□□□□ 0.97
POLR3DP05423 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC21.13■□□□□ 0.97
POLR3DP05423 RNPS1P1-201ENST00000507437 918 ntBASIC21.13■□□□□ 0.97
POLR3DP05423 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
POLR3DP05423 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC21.13■□□□□ 0.97
POLR3DP05423 AP001005.1-201ENST00000571755 1248 ntBASIC21.13■□□□□ 0.97
POLR3DP05423 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC21.13■□□□□ 0.97
POLR3DP05423 AC148477.8-201ENST00000624298 468 ntBASIC21.13■□□□□ 0.97
POLR3DP05423 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC21.13■□□□□ 0.97
POLR3DP05423 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
POLR3DP05423 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
POLR3DP05423 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
POLR3DP05423 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
POLR3DP05423 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.13■□□□□ 0.97
POLR3DP05423 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC21.12■□□□□ 0.97
POLR3DP05423 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
POLR3DP05423 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
POLR3DP05423 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
POLR3DP05423 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
POLR3DP05423 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.12■□□□□ 0.97
POLR3DP05423 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
POLR3DP05423 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC21.12■□□□□ 0.97
POLR3DP05423 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC21.12■□□□□ 0.97
POLR3DP05423 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
POLR3DP05423 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms