Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
OPN1SWP03999 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.57■□□□□ 0.24
OPN1SWP03999 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
OPN1SWP03999 CROCCP1-201ENST00000426910 5675 ntBASIC16.57■□□□□ 0.24
OPN1SWP03999 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
OPN1SWP03999 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
OPN1SWP03999 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
OPN1SWP03999 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
OPN1SWP03999 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
OPN1SWP03999 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
OPN1SWP03999 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
OPN1SWP03999 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
OPN1SWP03999 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.56■□□□□ 0.24
OPN1SWP03999 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
OPN1SWP03999 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
OPN1SWP03999 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.56■□□□□ 0.24
OPN1SWP03999 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.56■□□□□ 0.24
OPN1SWP03999 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
OPN1SWP03999 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.56■□□□□ 0.24
OPN1SWP03999 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.56■□□□□ 0.24
OPN1SWP03999 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
OPN1SWP03999 LINC01568-207ENST00000641790 1380 ntBASIC16.56■□□□□ 0.24
OPN1SWP03999 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.56■□□□□ 0.24
OPN1SWP03999 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
OPN1SWP03999 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
OPN1SWP03999 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
OPN1SWP03999 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
OPN1SWP03999 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.56■□□□□ 0.24
OPN1SWP03999 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.56■□□□□ 0.24
OPN1SWP03999 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.56■□□□□ 0.24
OPN1SWP03999 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.56■□□□□ 0.24
OPN1SWP03999 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
OPN1SWP03999 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.56■□□□□ 0.24
OPN1SWP03999 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.56■□□□□ 0.24
OPN1SWP03999 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
OPN1SWP03999 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.56■□□□□ 0.24
OPN1SWP03999 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
OPN1SWP03999 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
OPN1SWP03999 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
OPN1SWP03999 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
OPN1SWP03999 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
OPN1SWP03999 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
OPN1SWP03999 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
OPN1SWP03999 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
OPN1SWP03999 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
OPN1SWP03999 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
OPN1SWP03999 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
OPN1SWP03999 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
OPN1SWP03999 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
OPN1SWP03999 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.55■□□□□ 0.24
OPN1SWP03999 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
OPN1SWP03999 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
OPN1SWP03999 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
OPN1SWP03999 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
OPN1SWP03999 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
OPN1SWP03999 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.55■□□□□ 0.24
OPN1SWP03999 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
OPN1SWP03999 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
OPN1SWP03999 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.55■□□□□ 0.24
OPN1SWP03999 AP000523.1-201ENST00000398242 1049 ntBASIC16.55■□□□□ 0.24
OPN1SWP03999 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
OPN1SWP03999 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.55■□□□□ 0.24
OPN1SWP03999 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.55■□□□□ 0.24
OPN1SWP03999 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.55■□□□□ 0.24
OPN1SWP03999 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.55■□□□□ 0.24
OPN1SWP03999 AL023973.1-201ENST00000624619 620 ntBASIC16.55■□□□□ 0.24
OPN1SWP03999 AC141257.4-201ENST00000634557 245 ntBASIC16.55■□□□□ 0.24
OPN1SWP03999 AC136944.6-201ENST00000634818 245 ntBASIC16.55■□□□□ 0.24
OPN1SWP03999 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
OPN1SWP03999 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
OPN1SWP03999 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
OPN1SWP03999 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
OPN1SWP03999 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
OPN1SWP03999 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
OPN1SWP03999 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
OPN1SWP03999 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
OPN1SWP03999 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.55■□□□□ 0.24
OPN1SWP03999 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
OPN1SWP03999 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.54■□□□□ 0.24
OPN1SWP03999 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
OPN1SWP03999 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
OPN1SWP03999 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
OPN1SWP03999 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.54■□□□□ 0.24
OPN1SWP03999 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.54■□□□□ 0.24
OPN1SWP03999 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
OPN1SWP03999 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.54■□□□□ 0.24
OPN1SWP03999 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
OPN1SWP03999 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
OPN1SWP03999 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
OPN1SWP03999 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
OPN1SWP03999 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.54■□□□□ 0.24
OPN1SWP03999 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.54■□□□□ 0.24
OPN1SWP03999 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.54■□□□□ 0.24
OPN1SWP03999 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.54■□□□□ 0.24
OPN1SWP03999 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
OPN1SWP03999 AC113404.2-201ENST00000507884 177 ntBASIC16.54■□□□□ 0.24
OPN1SWP03999 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.54■□□□□ 0.24
OPN1SWP03999 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
OPN1SWP03999 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
OPN1SWP03999 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms