Protein–RNA interactions for Protein: P02788

LTF, Lactotransferrin, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTFP02788 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
LTFP02788 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.51■□□□□ 0.55
LTFP02788 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.51■□□□□ 0.55
LTFP02788 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LTFP02788 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LTFP02788 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.51■□□□□ 0.55
LTFP02788 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LTFP02788 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
LTFP02788 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LTFP02788 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LTFP02788 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LTFP02788 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LTFP02788 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.51■□□□□ 0.55
LTFP02788 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.51■□□□□ 0.55
LTFP02788 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
LTFP02788 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LTFP02788 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.51■□□□□ 0.55
LTFP02788 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
LTFP02788 AC111152.3-201ENST00000569699 673 ntBASIC18.51■□□□□ 0.55
LTFP02788 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LTFP02788 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.51■□□□□ 0.55
LTFP02788 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.51■□□□□ 0.55
LTFP02788 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LTFP02788 LINC01711-201ENST00000598340 967 ntBASIC18.51■□□□□ 0.55
LTFP02788 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.51■□□□□ 0.55
LTFP02788 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
LTFP02788 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LTFP02788 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.51■□□□□ 0.55
LTFP02788 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
LTFP02788 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LTFP02788 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.51■□□□□ 0.55
LTFP02788 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LTFP02788 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LTFP02788 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LTFP02788 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
LTFP02788 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LTFP02788 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LTFP02788 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LTFP02788 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LTFP02788 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LTFP02788 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LTFP02788 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LTFP02788 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LTFP02788 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LTFP02788 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LTFP02788 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LTFP02788 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LTFP02788 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.5■□□□□ 0.55
LTFP02788 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.5■□□□□ 0.55
LTFP02788 UNC93B7-201ENST00000509439 705 ntBASIC18.5■□□□□ 0.55
LTFP02788 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LTFP02788 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.5■□□□□ 0.55
LTFP02788 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.5■□□□□ 0.55
LTFP02788 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LTFP02788 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.5■□□□□ 0.55
LTFP02788 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.5■□□□□ 0.55
LTFP02788 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.5■□□□□ 0.55
LTFP02788 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.5■□□□□ 0.55
LTFP02788 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LTFP02788 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LTFP02788 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LTFP02788 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.5■□□□□ 0.55
LTFP02788 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LTFP02788 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
LTFP02788 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.49■□□□□ 0.55
LTFP02788 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.49■□□□□ 0.55
LTFP02788 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LTFP02788 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LTFP02788 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LTFP02788 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LTFP02788 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LTFP02788 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LTFP02788 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LTFP02788 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
LTFP02788 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.49■□□□□ 0.55
LTFP02788 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
LTFP02788 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LTFP02788 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.49■□□□□ 0.55
LTFP02788 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.49■□□□□ 0.55
LTFP02788 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
LTFP02788 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LTFP02788 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LTFP02788 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LTFP02788 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.49■□□□□ 0.55
LTFP02788 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.49■□□□□ 0.55
LTFP02788 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.49■□□□□ 0.55
LTFP02788 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.49■□□□□ 0.55
LTFP02788 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.49■□□□□ 0.55
LTFP02788 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.49■□□□□ 0.55
LTFP02788 AC103564.2-201ENST00000432853 1299 ntBASIC18.49■□□□□ 0.55
LTFP02788 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.49■□□□□ 0.55
LTFP02788 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
LTFP02788 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.49■□□□□ 0.55
LTFP02788 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.49■□□□□ 0.55
LTFP02788 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
LTFP02788 SIRPAP1-201ENST00000448467 1770 ntBASIC18.49■□□□□ 0.55
LTFP02788 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LTFP02788 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LTFP02788 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LTFP02788 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms