Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN1O95832 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CLDN1O95832 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CLDN1O95832 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN1O95832 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC15.8■□□□□ 0.12
CLDN1O95832 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN1O95832 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN1O95832 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN1O95832 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN1O95832 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN1O95832 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.8■□□□□ 0.12
CLDN1O95832 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.8■□□□□ 0.12
CLDN1O95832 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN1O95832 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN1O95832 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN1O95832 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CLDN1O95832 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CLDN1O95832 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN1O95832 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CLDN1O95832 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN1O95832 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN1O95832 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN1O95832 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN1O95832 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.8■□□□□ 0.12
CLDN1O95832 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.8■□□□□ 0.12
CLDN1O95832 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.8■□□□□ 0.12
CLDN1O95832 BCRP1-201ENST00000444246 691 ntBASIC15.8■□□□□ 0.12
CLDN1O95832 PAWRP1-201ENST00000451083 565 ntBASIC15.8■□□□□ 0.12
CLDN1O95832 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CLDN1O95832 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN1O95832 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.8■□□□□ 0.12
CLDN1O95832 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.8■□□□□ 0.12
CLDN1O95832 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN1O95832 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN1O95832 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN1O95832 AL049812.1-201ENST00000432563 2267 ntBASIC15.8■□□□□ 0.12
CLDN1O95832 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC15.8■□□□□ 0.12
CLDN1O95832 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
CLDN1O95832 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN1O95832 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CLDN1O95832 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CLDN1O95832 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN1O95832 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN1O95832 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN1O95832 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN1O95832 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN1O95832 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN1O95832 AL138781.2-201ENST00000617896 1843 ntBASIC15.8■□□□□ 0.12
CLDN1O95832 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN1O95832 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CLDN1O95832 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN1O95832 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN1O95832 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN1O95832 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CLDN1O95832 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN1O95832 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN1O95832 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN1O95832 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN1O95832 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN1O95832 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN1O95832 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC15.79■□□□□ 0.12
CLDN1O95832 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN1O95832 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
CLDN1O95832 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDN1O95832 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN1O95832 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN1O95832 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CLDN1O95832 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN1O95832 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CLDN1O95832 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN1O95832 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
CLDN1O95832 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.79■□□□□ 0.12
CLDN1O95832 AC108751.1-201ENST00000490852 363 ntBASIC15.79■□□□□ 0.12
CLDN1O95832 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.79■□□□□ 0.12
CLDN1O95832 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDN1O95832 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDN1O95832 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.79■□□□□ 0.12
CLDN1O95832 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN1O95832 MIR1199-201ENST00000621445 119 ntBASIC15.79■□□□□ 0.12
CLDN1O95832 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.79■□□□□ 0.12
CLDN1O95832 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.79■□□□□ 0.12
CLDN1O95832 AC092865.6-201ENST00000642101 219 ntBASIC15.79■□□□□ 0.12
CLDN1O95832 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN1O95832 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
CLDN1O95832 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN1O95832 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CLDN1O95832 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
CLDN1O95832 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CLDN1O95832 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC15.79■□□□□ 0.12
CLDN1O95832 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.79■□□□□ 0.12
CLDN1O95832 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.79■□□□□ 0.12
CLDN1O95832 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN1O95832 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN1O95832 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.79■□□□□ 0.12
CLDN1O95832 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN1O95832 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN1O95832 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN1O95832 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN1O95832 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
CLDN1O95832 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms