Protein–RNA interactions for Protein: O95696

BRD1, Bromodomain-containing protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD1O95696 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
BRD1O95696 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.64■□□□□ 0.89
BRD1O95696 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.64■□□□□ 0.89
BRD1O95696 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.64■□□□□ 0.89
BRD1O95696 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
BRD1O95696 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
BRD1O95696 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BRD1O95696 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BRD1O95696 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
BRD1O95696 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BRD1O95696 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BRD1O95696 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BRD1O95696 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BRD1O95696 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BRD1O95696 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
BRD1O95696 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BRD1O95696 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
BRD1O95696 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BRD1O95696 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BRD1O95696 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BRD1O95696 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.63■□□□□ 0.89
BRD1O95696 AC005104.2-201ENST00000427818 678 ntBASIC20.63■□□□□ 0.89
BRD1O95696 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.63■□□□□ 0.89
BRD1O95696 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.63■□□□□ 0.89
BRD1O95696 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
BRD1O95696 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
BRD1O95696 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BRD1O95696 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BRD1O95696 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BRD1O95696 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC20.63■□□□□ 0.89
BRD1O95696 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
BRD1O95696 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BRD1O95696 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BRD1O95696 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BRD1O95696 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
BRD1O95696 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
BRD1O95696 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BRD1O95696 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
BRD1O95696 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
BRD1O95696 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BRD1O95696 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.62■□□□□ 0.89
BRD1O95696 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
BRD1O95696 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
BRD1O95696 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
BRD1O95696 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
BRD1O95696 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BRD1O95696 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BRD1O95696 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BRD1O95696 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
BRD1O95696 AL512604.3-201ENST00000569583 964 ntBASIC20.62■□□□□ 0.89
BRD1O95696 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
BRD1O95696 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.62■□□□□ 0.89
BRD1O95696 AC091076.1-201ENST00000610741 619 ntBASIC20.62■□□□□ 0.89
BRD1O95696 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.62■□□□□ 0.89
BRD1O95696 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.62■□□□□ 0.89
BRD1O95696 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
BRD1O95696 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
BRD1O95696 AC105020.1-201ENST00000435356 2205 ntBASIC20.62■□□□□ 0.89
BRD1O95696 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
BRD1O95696 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
BRD1O95696 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
BRD1O95696 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BRD1O95696 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
BRD1O95696 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.61■□□□□ 0.89
BRD1O95696 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
BRD1O95696 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.61■□□□□ 0.89
BRD1O95696 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BRD1O95696 AC116353.5-201ENST00000638148 1699 ntBASIC20.61■□□□□ 0.89
BRD1O95696 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
BRD1O95696 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
BRD1O95696 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
BRD1O95696 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BRD1O95696 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BRD1O95696 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BRD1O95696 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.61■□□□□ 0.89
BRD1O95696 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BRD1O95696 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BRD1O95696 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.61■□□□□ 0.89
BRD1O95696 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.61■□□□□ 0.89
BRD1O95696 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.61■□□□□ 0.89
BRD1O95696 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
BRD1O95696 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
BRD1O95696 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.61■□□□□ 0.89
BRD1O95696 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
BRD1O95696 UBALD1-205ENST00000590891 2641 ntBASIC20.61■□□□□ 0.89
BRD1O95696 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.61■□□□□ 0.89
BRD1O95696 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BRD1O95696 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
BRD1O95696 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.61■□□□□ 0.89
BRD1O95696 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BRD1O95696 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
BRD1O95696 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC20.6■□□□□ 0.89
BRD1O95696 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
BRD1O95696 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BRD1O95696 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BRD1O95696 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
BRD1O95696 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.6■□□□□ 0.89
BRD1O95696 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
BRD1O95696 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BRD1O95696 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms