Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.02■□□□□ 0.16
PPP1R3DO95685 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PPP1R3DO95685 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.02■□□□□ 0.16
PPP1R3DO95685 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PPP1R3DO95685 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PPP1R3DO95685 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.02■□□□□ 0.16
PPP1R3DO95685 DDX43P3-201ENST00000441064 443 ntBASIC16.02■□□□□ 0.16
PPP1R3DO95685 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
PPP1R3DO95685 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PPP1R3DO95685 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PPP1R3DO95685 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.02■□□□□ 0.16
PPP1R3DO95685 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.02■□□□□ 0.16
PPP1R3DO95685 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.02■□□□□ 0.16
PPP1R3DO95685 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.02■□□□□ 0.16
PPP1R3DO95685 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PPP1R3DO95685 AC004263.2-201ENST00000617183 678 ntBASIC16.02■□□□□ 0.16
PPP1R3DO95685 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PPP1R3DO95685 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
PPP1R3DO95685 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PPP1R3DO95685 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
PPP1R3DO95685 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PPP1R3DO95685 KRT89P-201ENST00000620027 1478 ntBASIC16.02■□□□□ 0.15
PPP1R3DO95685 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PPP1R3DO95685 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PPP1R3DO95685 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PPP1R3DO95685 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PPP1R3DO95685 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PPP1R3DO95685 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.02■□□□□ 0.15
PPP1R3DO95685 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PPP1R3DO95685 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PPP1R3DO95685 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PPP1R3DO95685 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
PPP1R3DO95685 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PPP1R3DO95685 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.01■□□□□ 0.15
PPP1R3DO95685 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PPP1R3DO95685 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PPP1R3DO95685 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.01■□□□□ 0.15
PPP1R3DO95685 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
PPP1R3DO95685 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PPP1R3DO95685 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PPP1R3DO95685 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
PPP1R3DO95685 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
PPP1R3DO95685 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PPP1R3DO95685 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.01■□□□□ 0.15
PPP1R3DO95685 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.01■□□□□ 0.15
PPP1R3DO95685 AC087499.1-201ENST00000418141 1075 ntBASIC16.01■□□□□ 0.15
PPP1R3DO95685 SLC25A3P1-201ENST00000443844 931 ntBASIC16.01■□□□□ 0.15
PPP1R3DO95685 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
PPP1R3DO95685 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.01■□□□□ 0.15
PPP1R3DO95685 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.01■□□□□ 0.15
PPP1R3DO95685 AC145285.6-201ENST00000604632 637 ntBASIC16.01■□□□□ 0.15
PPP1R3DO95685 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.01■□□□□ 0.15
PPP1R3DO95685 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PPP1R3DO95685 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PPP1R3DO95685 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PPP1R3DO95685 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PPP1R3DO95685 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PPP1R3DO95685 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.01■□□□□ 0.15
PPP1R3DO95685 CROCCP1-201ENST00000426910 5675 ntBASIC16.01■□□□□ 0.15
PPP1R3DO95685 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PPP1R3DO95685 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
PPP1R3DO95685 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PPP1R3DO95685 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PPP1R3DO95685 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PPP1R3DO95685 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PPP1R3DO95685 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16■□□□□ 0.15
PPP1R3DO95685 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16■□□□□ 0.15
PPP1R3DO95685 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PPP1R3DO95685 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PPP1R3DO95685 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PPP1R3DO95685 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
PPP1R3DO95685 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16■□□□□ 0.15
PPP1R3DO95685 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
PPP1R3DO95685 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PPP1R3DO95685 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16■□□□□ 0.15
PPP1R3DO95685 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
PPP1R3DO95685 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16■□□□□ 0.15
PPP1R3DO95685 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16■□□□□ 0.15
PPP1R3DO95685 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PPP1R3DO95685 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PPP1R3DO95685 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16■□□□□ 0.15
PPP1R3DO95685 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16■□□□□ 0.15
PPP1R3DO95685 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PPP1R3DO95685 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16■□□□□ 0.15
PPP1R3DO95685 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16■□□□□ 0.15
PPP1R3DO95685 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PPP1R3DO95685 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
PPP1R3DO95685 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PPP1R3DO95685 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PPP1R3DO95685 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PPP1R3DO95685 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PPP1R3DO95685 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PPP1R3DO95685 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.99■□□□□ 0.15
PPP1R3DO95685 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PPP1R3DO95685 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PPP1R3DO95685 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PPP1R3DO95685 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PPP1R3DO95685 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
PPP1R3DO95685 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PPP1R3DO95685 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms