Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
PCF11O94913 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC27.38■■□□□ 1.97
PCF11O94913 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC27.38■■□□□ 1.97
PCF11O94913 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
PCF11O94913 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
PCF11O94913 ENSA-206ENST00000361631 725 ntTSL 2 BASIC27.38■■□□□ 1.97
PCF11O94913 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC27.38■■□□□ 1.97
PCF11O94913 TK1-204ENST00000590430 683 ntTSL 3 BASIC27.38■■□□□ 1.97
PCF11O94913 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC27.38■■□□□ 1.97
PCF11O94913 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC27.38■■□□□ 1.97
PCF11O94913 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC27.37■■□□□ 1.97
PCF11O94913 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PCF11O94913 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
PCF11O94913 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PCF11O94913 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PCF11O94913 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC27.37■■□□□ 1.97
PCF11O94913 PTCHD3P3-201ENST00000403073 906 ntBASIC27.37■■□□□ 1.97
PCF11O94913 ADH5P3-201ENST00000433842 1137 ntBASIC27.37■■□□□ 1.97
PCF11O94913 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC27.37■■□□□ 1.97
PCF11O94913 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC27.37■■□□□ 1.97
PCF11O94913 CYB561-216ENST00000582297 897 ntTSL 3 BASIC27.37■■□□□ 1.97
PCF11O94913 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC27.37■■□□□ 1.97
PCF11O94913 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PCF11O94913 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PCF11O94913 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC27.37■■□□□ 1.97
PCF11O94913 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC27.37■■□□□ 1.97
PCF11O94913 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PCF11O94913 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PCF11O94913 AC004408.2-201ENST00000623613 2777 ntBASIC27.36■■□□□ 1.97
PCF11O94913 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PCF11O94913 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
PCF11O94913 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PCF11O94913 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC27.36■■□□□ 1.97
PCF11O94913 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC27.36■■□□□ 1.97
PCF11O94913 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
PCF11O94913 PC-214ENST00000628663 1470 ntTSL 5 BASIC27.36■■□□□ 1.97
PCF11O94913 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC27.36■■□□□ 1.97
PCF11O94913 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PCF11O94913 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC27.36■■□□□ 1.97
PCF11O94913 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC27.36■■□□□ 1.97
PCF11O94913 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
PCF11O94913 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC27.36■■□□□ 1.97
PCF11O94913 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC27.36■■□□□ 1.97
PCF11O94913 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC27.36■■□□□ 1.97
PCF11O94913 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC27.35■■□□□ 1.97
PCF11O94913 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PCF11O94913 PRSS29P-201ENST00000440800 595 ntBASIC27.35■■□□□ 1.97
PCF11O94913 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PCF11O94913 AC027612.4-201ENST00000605371 583 ntBASIC27.35■■□□□ 1.97
PCF11O94913 BICD1-207ENST00000551848 1962 ntBASIC27.35■■□□□ 1.97
PCF11O94913 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PCF11O94913 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC27.35■■□□□ 1.97
PCF11O94913 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PCF11O94913 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PCF11O94913 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC27.35■■□□□ 1.97
PCF11O94913 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC27.35■■□□□ 1.97
PCF11O94913 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PCF11O94913 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PCF11O94913 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC27.35■■□□□ 1.97
PCF11O94913 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC27.35■■□□□ 1.97
PCF11O94913 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC27.35■■□□□ 1.97
PCF11O94913 SYS1-203ENST00000414310 795 ntTSL 3 BASIC27.35■■□□□ 1.97
PCF11O94913 VN2R19P-201ENST00000442399 1052 ntBASIC27.35■■□□□ 1.97
PCF11O94913 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PCF11O94913 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC27.35■■□□□ 1.97
PCF11O94913 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC27.35■■□□□ 1.97
PCF11O94913 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC27.34■■□□□ 1.97
PCF11O94913 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
PCF11O94913 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
PCF11O94913 AC046185.3-201ENST00000623228 1824 ntBASIC27.34■■□□□ 1.97
PCF11O94913 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
PCF11O94913 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
PCF11O94913 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
PCF11O94913 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PCF11O94913 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC27.34■■□□□ 1.97
PCF11O94913 MIR770-201ENST00000390219 98 ntBASIC27.34■■□□□ 1.97
PCF11O94913 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PCF11O94913 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
PCF11O94913 AL596442.2-201ENST00000610240 980 ntBASIC27.34■■□□□ 1.97
PCF11O94913 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC27.34■■□□□ 1.97
PCF11O94913 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PCF11O94913 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC27.33■■□□□ 1.97
PCF11O94913 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PCF11O94913 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
PCF11O94913 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PCF11O94913 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
PCF11O94913 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
PCF11O94913 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
PCF11O94913 AC087163.2-201ENST00000457299 853 ntBASIC27.33■■□□□ 1.97
PCF11O94913 PUS1-205ENST00000535067 838 ntTSL 3 BASIC27.33■■□□□ 1.97
PCF11O94913 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC27.33■■□□□ 1.97
PCF11O94913 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC27.33■■□□□ 1.97
PCF11O94913 MTDHP5-201ENST00000598980 586 ntBASIC27.33■■□□□ 1.97
PCF11O94913 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PCF11O94913 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC27.33■■□□□ 1.97
PCF11O94913 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC27.33■■□□□ 1.97
PCF11O94913 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC27.33■■□□□ 1.97
PCF11O94913 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
PCF11O94913 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
PCF11O94913 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC27.33■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms