Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 AC027612.4-201ENST00000605371 583 ntBASIC15.99■□□□□ 0.15
CEACAM4O75871 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CEACAM4O75871 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.99■□□□□ 0.15
CEACAM4O75871 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.99■□□□□ 0.15
CEACAM4O75871 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.99■□□□□ 0.15
CEACAM4O75871 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CEACAM4O75871 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CEACAM4O75871 AC025580.3-201ENST00000617932 1424 ntBASIC15.99■□□□□ 0.15
CEACAM4O75871 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CEACAM4O75871 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CEACAM4O75871 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CEACAM4O75871 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CEACAM4O75871 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CEACAM4O75871 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CEACAM4O75871 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CEACAM4O75871 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CEACAM4O75871 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CEACAM4O75871 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CEACAM4O75871 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.98■□□□□ 0.15
CEACAM4O75871 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
CEACAM4O75871 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
CEACAM4O75871 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CEACAM4O75871 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CEACAM4O75871 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CEACAM4O75871 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CEACAM4O75871 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CEACAM4O75871 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CEACAM4O75871 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
CEACAM4O75871 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.98■□□□□ 0.15
CEACAM4O75871 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.98■□□□□ 0.15
CEACAM4O75871 FAM58CP-201ENST00000435741 640 ntBASIC15.98■□□□□ 0.15
CEACAM4O75871 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.98■□□□□ 0.15
CEACAM4O75871 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.98■□□□□ 0.15
CEACAM4O75871 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.98■□□□□ 0.15
CEACAM4O75871 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.98■□□□□ 0.15
CEACAM4O75871 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.98■□□□□ 0.15
CEACAM4O75871 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.98■□□□□ 0.15
CEACAM4O75871 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.98■□□□□ 0.15
CEACAM4O75871 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.98■□□□□ 0.15
CEACAM4O75871 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CEACAM4O75871 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CEACAM4O75871 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CEACAM4O75871 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CEACAM4O75871 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CEACAM4O75871 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CEACAM4O75871 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CEACAM4O75871 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CEACAM4O75871 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CEACAM4O75871 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.97■□□□□ 0.15
CEACAM4O75871 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CEACAM4O75871 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.97■□□□□ 0.15
CEACAM4O75871 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CEACAM4O75871 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CEACAM4O75871 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.97■□□□□ 0.15
CEACAM4O75871 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
CEACAM4O75871 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CEACAM4O75871 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.97■□□□□ 0.15
CEACAM4O75871 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CEACAM4O75871 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.97■□□□□ 0.15
CEACAM4O75871 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.97■□□□□ 0.15
CEACAM4O75871 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CEACAM4O75871 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CEACAM4O75871 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.97■□□□□ 0.15
CEACAM4O75871 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.97■□□□□ 0.15
CEACAM4O75871 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.97■□□□□ 0.15
CEACAM4O75871 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.97■□□□□ 0.15
CEACAM4O75871 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.97■□□□□ 0.15
CEACAM4O75871 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.97■□□□□ 0.15
CEACAM4O75871 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.97■□□□□ 0.15
CEACAM4O75871 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CEACAM4O75871 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CEACAM4O75871 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.97■□□□□ 0.15
CEACAM4O75871 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CEACAM4O75871 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.97■□□□□ 0.15
CEACAM4O75871 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CEACAM4O75871 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
CEACAM4O75871 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
CEACAM4O75871 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CEACAM4O75871 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CEACAM4O75871 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CEACAM4O75871 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
CEACAM4O75871 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CEACAM4O75871 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CEACAM4O75871 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CEACAM4O75871 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
CEACAM4O75871 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CEACAM4O75871 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CEACAM4O75871 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CEACAM4O75871 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CEACAM4O75871 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.96■□□□□ 0.15
CEACAM4O75871 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC15.96■□□□□ 0.15
CEACAM4O75871 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CEACAM4O75871 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CEACAM4O75871 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CEACAM4O75871 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CEACAM4O75871 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
CEACAM4O75871 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
CEACAM4O75871 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.95■□□□□ 0.14
CEACAM4O75871 AL590787.1-201ENST00000568856 1315 ntBASIC15.95■□□□□ 0.14
CEACAM4O75871 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms