Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
GPC4O75487 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GPC4O75487 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
GPC4O75487 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GPC4O75487 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GPC4O75487 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GPC4O75487 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
GPC4O75487 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.77■□□□□ 0.44
GPC4O75487 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.77■□□□□ 0.44
GPC4O75487 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GPC4O75487 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.77■□□□□ 0.44
GPC4O75487 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GPC4O75487 SIRPAP1-201ENST00000448467 1770 ntBASIC17.77■□□□□ 0.44
GPC4O75487 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
GPC4O75487 IGHGP-201ENST00000390555 1178 ntBASIC17.77■□□□□ 0.44
GPC4O75487 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.77■□□□□ 0.44
GPC4O75487 AP003733.1-201ENST00000491725 852 ntBASIC17.77■□□□□ 0.44
GPC4O75487 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GPC4O75487 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.77■□□□□ 0.44
GPC4O75487 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.77■□□□□ 0.44
GPC4O75487 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.77■□□□□ 0.44
GPC4O75487 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.77■□□□□ 0.44
GPC4O75487 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.77■□□□□ 0.44
GPC4O75487 AL121956.5-201ENST00000625261 221 ntBASIC17.77■□□□□ 0.44
GPC4O75487 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GPC4O75487 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
GPC4O75487 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GPC4O75487 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GPC4O75487 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GPC4O75487 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
GPC4O75487 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
GPC4O75487 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GPC4O75487 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
GPC4O75487 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.77■□□□□ 0.43
GPC4O75487 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
GPC4O75487 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
GPC4O75487 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GPC4O75487 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GPC4O75487 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.76■□□□□ 0.43
GPC4O75487 AC012317.2-201ENST00000623305 2251 ntBASIC17.76■□□□□ 0.43
GPC4O75487 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GPC4O75487 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GPC4O75487 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.76■□□□□ 0.43
GPC4O75487 DUTP2-201ENST00000519164 463 ntBASIC17.76■□□□□ 0.43
GPC4O75487 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.76■□□□□ 0.43
GPC4O75487 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.76■□□□□ 0.43
GPC4O75487 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.76■□□□□ 0.43
GPC4O75487 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.76■□□□□ 0.43
GPC4O75487 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.76■□□□□ 0.43
GPC4O75487 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
GPC4O75487 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.76■□□□□ 0.43
GPC4O75487 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.76■□□□□ 0.43
GPC4O75487 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GPC4O75487 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.76■□□□□ 0.43
GPC4O75487 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.76■□□□□ 0.43
GPC4O75487 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GPC4O75487 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
GPC4O75487 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GPC4O75487 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
GPC4O75487 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GPC4O75487 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
GPC4O75487 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GPC4O75487 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.76■□□□□ 0.43
GPC4O75487 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
GPC4O75487 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GPC4O75487 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GPC4O75487 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GPC4O75487 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
GPC4O75487 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
GPC4O75487 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.75■□□□□ 0.43
GPC4O75487 LINC00602-201ENST00000629776 2065 ntBASIC17.75■□□□□ 0.43
GPC4O75487 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.75■□□□□ 0.43
GPC4O75487 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
GPC4O75487 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GPC4O75487 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GPC4O75487 AL645929.1-201ENST00000420084 975 ntBASIC17.75■□□□□ 0.43
GPC4O75487 FAM86EP-206ENST00000510506 987 ntBASIC17.75■□□□□ 0.43
GPC4O75487 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.75■□□□□ 0.43
GPC4O75487 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.75■□□□□ 0.43
GPC4O75487 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.75■□□□□ 0.43
GPC4O75487 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.75■□□□□ 0.43
GPC4O75487 RNF126P1-202ENST00000569893 925 ntBASIC17.75■□□□□ 0.43
GPC4O75487 AC004263.2-201ENST00000617183 678 ntBASIC17.75■□□□□ 0.43
GPC4O75487 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.75■□□□□ 0.43
GPC4O75487 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GPC4O75487 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GPC4O75487 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GPC4O75487 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
GPC4O75487 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
GPC4O75487 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GPC4O75487 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GPC4O75487 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GPC4O75487 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC4O75487 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
GPC4O75487 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC4O75487 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.74■□□□□ 0.43
GPC4O75487 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC4O75487 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC4O75487 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GPC4O75487 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms