Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LGR5O75473 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.6■□□□□ 0.73
LGR5O75473 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
LGR5O75473 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
LGR5O75473 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LGR5O75473 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.6■□□□□ 0.73
LGR5O75473 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
LGR5O75473 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.6■□□□□ 0.73
LGR5O75473 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
LGR5O75473 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.6■□□□□ 0.73
LGR5O75473 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.6■□□□□ 0.73
LGR5O75473 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.6■□□□□ 0.73
LGR5O75473 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.6■□□□□ 0.73
LGR5O75473 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.6■□□□□ 0.73
LGR5O75473 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
LGR5O75473 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.6■□□□□ 0.73
LGR5O75473 AC006557.2-201ENST00000592985 1240 ntBASIC19.6■□□□□ 0.73
LGR5O75473 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.6■□□□□ 0.73
LGR5O75473 AC055717.3-201ENST00000622967 595 ntBASIC19.6■□□□□ 0.73
LGR5O75473 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LGR5O75473 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LGR5O75473 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LGR5O75473 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LGR5O75473 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
LGR5O75473 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
LGR5O75473 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
LGR5O75473 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LGR5O75473 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.6■□□□□ 0.73
LGR5O75473 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LGR5O75473 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LGR5O75473 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LGR5O75473 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
LGR5O75473 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LGR5O75473 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.59■□□□□ 0.73
LGR5O75473 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LGR5O75473 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
LGR5O75473 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LGR5O75473 LTB4R2-202ENST00000528054 3092 ntBASIC19.59■□□□□ 0.73
LGR5O75473 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LGR5O75473 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
LGR5O75473 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
LGR5O75473 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.59■□□□□ 0.73
LGR5O75473 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.59■□□□□ 0.73
LGR5O75473 UPF3AP3-201ENST00000420996 769 ntBASIC19.59■□□□□ 0.73
LGR5O75473 KRT18P3-201ENST00000451602 1288 ntBASIC19.59■□□□□ 0.73
LGR5O75473 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.59■□□□□ 0.73
LGR5O75473 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.59■□□□□ 0.73
LGR5O75473 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.59■□□□□ 0.73
LGR5O75473 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.59■□□□□ 0.73
LGR5O75473 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
LGR5O75473 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
LGR5O75473 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.59■□□□□ 0.73
LGR5O75473 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LGR5O75473 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LGR5O75473 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.59■□□□□ 0.73
LGR5O75473 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LGR5O75473 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LGR5O75473 AC106820.2-201ENST00000563775 3264 ntBASIC19.59■□□□□ 0.73
LGR5O75473 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.59■□□□□ 0.73
LGR5O75473 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.59■□□□□ 0.73
LGR5O75473 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LGR5O75473 ABALON-201ENST00000629058 1903 ntBASIC19.59■□□□□ 0.73
LGR5O75473 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
LGR5O75473 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LGR5O75473 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LGR5O75473 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
LGR5O75473 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
LGR5O75473 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LGR5O75473 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.58■□□□□ 0.73
LGR5O75473 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LGR5O75473 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
LGR5O75473 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LGR5O75473 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
LGR5O75473 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.58■□□□□ 0.72
LGR5O75473 SIGLEC30P-201ENST00000455569 941 ntBASIC19.58■□□□□ 0.72
LGR5O75473 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.58■□□□□ 0.72
LGR5O75473 IGHV3-52-201ENST00000519770 353 ntBASIC19.58■□□□□ 0.72
LGR5O75473 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LGR5O75473 UNC93B6-202ENST00000528242 690 ntBASIC19.58■□□□□ 0.72
LGR5O75473 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.58■□□□□ 0.72
LGR5O75473 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LGR5O75473 AC004706.3-202ENST00000621574 984 ntBASIC19.58■□□□□ 0.72
LGR5O75473 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.58■□□□□ 0.72
LGR5O75473 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LGR5O75473 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.58■□□□□ 0.72
LGR5O75473 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
LGR5O75473 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LGR5O75473 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LGR5O75473 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.58■□□□□ 0.72
LGR5O75473 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
LGR5O75473 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
LGR5O75473 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LGR5O75473 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.58■□□□□ 0.72
LGR5O75473 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LGR5O75473 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LGR5O75473 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
LGR5O75473 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.58■□□□□ 0.72
LGR5O75473 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.57■□□□□ 0.72
LGR5O75473 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LGR5O75473 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms