Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
LCMT2O60294 LINC00304-203ENST00000565008 1864 ntBASIC16.93■□□□□ 0.3
LCMT2O60294 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
LCMT2O60294 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LCMT2O60294 SIRPAP1-201ENST00000448467 1770 ntBASIC16.93■□□□□ 0.3
LCMT2O60294 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LCMT2O60294 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LCMT2O60294 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LCMT2O60294 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.93■□□□□ 0.3
LCMT2O60294 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
LCMT2O60294 POM121L3P-201ENST00000419331 1163 ntBASIC16.93■□□□□ 0.3
LCMT2O60294 NUS1P1-201ENST00000446295 882 ntBASIC16.93■□□□□ 0.3
LCMT2O60294 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.93■□□□□ 0.3
LCMT2O60294 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.93■□□□□ 0.3
LCMT2O60294 AC138894.3-201ENST00000603787 634 ntBASIC16.93■□□□□ 0.3
LCMT2O60294 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.93■□□□□ 0.3
LCMT2O60294 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LCMT2O60294 INTS4P1-201ENST00000438455 1935 ntBASIC16.93■□□□□ 0.3
LCMT2O60294 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LCMT2O60294 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LCMT2O60294 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LCMT2O60294 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LCMT2O60294 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
LCMT2O60294 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
LCMT2O60294 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.93■□□□□ 0.3
LCMT2O60294 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.93■□□□□ 0.3
LCMT2O60294 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
LCMT2O60294 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
LCMT2O60294 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LCMT2O60294 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
LCMT2O60294 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LCMT2O60294 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LCMT2O60294 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LCMT2O60294 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
LCMT2O60294 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.92■□□□□ 0.3
LCMT2O60294 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
LCMT2O60294 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LCMT2O60294 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LCMT2O60294 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.92■□□□□ 0.3
LCMT2O60294 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.92■□□□□ 0.3
LCMT2O60294 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.92■□□□□ 0.3
LCMT2O60294 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.92■□□□□ 0.3
LCMT2O60294 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LCMT2O60294 CLEC4GP1-201ENST00000596555 870 ntBASIC16.92■□□□□ 0.3
LCMT2O60294 LINC00896-202ENST00000609602 2128 ntBASIC16.92■□□□□ 0.3
LCMT2O60294 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.92■□□□□ 0.3
LCMT2O60294 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
LCMT2O60294 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.92■□□□□ 0.3
LCMT2O60294 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LCMT2O60294 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
LCMT2O60294 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LCMT2O60294 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LCMT2O60294 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LCMT2O60294 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LCMT2O60294 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
LCMT2O60294 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LCMT2O60294 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.92■□□□□ 0.3
LCMT2O60294 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.92■□□□□ 0.3
LCMT2O60294 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LCMT2O60294 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LCMT2O60294 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.92■□□□□ 0.3
LCMT2O60294 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LCMT2O60294 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LCMT2O60294 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LCMT2O60294 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LCMT2O60294 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LCMT2O60294 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.91■□□□□ 0.3
LCMT2O60294 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LCMT2O60294 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LCMT2O60294 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LCMT2O60294 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LCMT2O60294 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
LCMT2O60294 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.91■□□□□ 0.3
LCMT2O60294 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LCMT2O60294 FAM220CP-201ENST00000395253 831 ntBASIC16.91■□□□□ 0.3
LCMT2O60294 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.91■□□□□ 0.3
LCMT2O60294 AC122714.2-201ENST00000502787 707 ntBASIC16.91■□□□□ 0.3
LCMT2O60294 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.91■□□□□ 0.3
LCMT2O60294 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.91■□□□□ 0.3
LCMT2O60294 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.91■□□□□ 0.3
LCMT2O60294 MIR5100-201ENST00000579544 119 ntBASIC16.91■□□□□ 0.3
LCMT2O60294 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.91■□□□□ 0.3
LCMT2O60294 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.91■□□□□ 0.3
LCMT2O60294 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.91■□□□□ 0.3
LCMT2O60294 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.91■□□□□ 0.3
LCMT2O60294 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LCMT2O60294 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.91■□□□□ 0.3
LCMT2O60294 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.91■□□□□ 0.3
LCMT2O60294 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.91■□□□□ 0.3
LCMT2O60294 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LCMT2O60294 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LCMT2O60294 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LCMT2O60294 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
LCMT2O60294 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCMT2O60294 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LCMT2O60294 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCMT2O60294 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCMT2O60294 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCMT2O60294 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
LCMT2O60294 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms