Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PEX1O43933 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PEX1O43933 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.31■□□□□ 0.36
PEX1O43933 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PEX1O43933 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PEX1O43933 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PEX1O43933 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.31■□□□□ 0.36
PEX1O43933 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
PEX1O43933 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.31■□□□□ 0.36
PEX1O43933 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PEX1O43933 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PEX1O43933 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PEX1O43933 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PEX1O43933 UBALD1-205ENST00000590891 2641 ntBASIC17.31■□□□□ 0.36
PEX1O43933 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PEX1O43933 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PEX1O43933 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PEX1O43933 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.3■□□□□ 0.36
PEX1O43933 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PEX1O43933 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PEX1O43933 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PEX1O43933 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PEX1O43933 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PEX1O43933 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PEX1O43933 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PEX1O43933 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
PEX1O43933 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.3■□□□□ 0.36
PEX1O43933 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.3■□□□□ 0.36
PEX1O43933 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PEX1O43933 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PEX1O43933 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PEX1O43933 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PEX1O43933 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.3■□□□□ 0.36
PEX1O43933 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.3■□□□□ 0.36
PEX1O43933 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.3■□□□□ 0.36
PEX1O43933 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
PEX1O43933 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PEX1O43933 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.3■□□□□ 0.36
PEX1O43933 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PEX1O43933 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PEX1O43933 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.3■□□□□ 0.36
PEX1O43933 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PEX1O43933 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.3■□□□□ 0.36
PEX1O43933 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
PEX1O43933 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PEX1O43933 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PEX1O43933 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.3■□□□□ 0.36
PEX1O43933 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PEX1O43933 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PEX1O43933 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PEX1O43933 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PEX1O43933 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PEX1O43933 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PEX1O43933 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
PEX1O43933 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PEX1O43933 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PEX1O43933 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PEX1O43933 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PEX1O43933 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PEX1O43933 PCDHB19P-201ENST00000570871 2371 ntBASIC17.29■□□□□ 0.36
PEX1O43933 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
PEX1O43933 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PEX1O43933 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PEX1O43933 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PEX1O43933 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PEX1O43933 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PEX1O43933 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PEX1O43933 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PEX1O43933 FAM8A6P-201ENST00000407496 1135 ntBASIC17.29■□□□□ 0.36
PEX1O43933 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.29■□□□□ 0.36
PEX1O43933 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PEX1O43933 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.29■□□□□ 0.36
PEX1O43933 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
PEX1O43933 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.29■□□□□ 0.36
PEX1O43933 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.29■□□□□ 0.36
PEX1O43933 AL023973.1-201ENST00000624619 620 ntBASIC17.29■□□□□ 0.36
PEX1O43933 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
PEX1O43933 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PEX1O43933 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PEX1O43933 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PEX1O43933 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PEX1O43933 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PEX1O43933 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PEX1O43933 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.29■□□□□ 0.36
PEX1O43933 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PEX1O43933 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PEX1O43933 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.29■□□□□ 0.36
PEX1O43933 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PEX1O43933 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
PEX1O43933 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PEX1O43933 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PEX1O43933 CROCCP1-201ENST00000426910 5675 ntBASIC17.29■□□□□ 0.36
PEX1O43933 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PEX1O43933 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PEX1O43933 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PEX1O43933 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PEX1O43933 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.28■□□□□ 0.36
PEX1O43933 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.28■□□□□ 0.36
PEX1O43933 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PEX1O43933 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms