Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP2AO43633 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP2AO43633 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP2AO43633 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP2AO43633 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP2AO43633 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.92■□□□□ 0.78
CHMP2AO43633 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP2AO43633 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP2AO43633 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP2AO43633 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.92■□□□□ 0.78
CHMP2AO43633 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP2AO43633 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP2AO43633 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
CHMP2AO43633 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.92■□□□□ 0.78
CHMP2AO43633 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.92■□□□□ 0.78
CHMP2AO43633 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.92■□□□□ 0.78
CHMP2AO43633 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP2AO43633 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP2AO43633 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP2AO43633 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP2AO43633 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.92■□□□□ 0.78
CHMP2AO43633 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CHMP2AO43633 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.92■□□□□ 0.78
CHMP2AO43633 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP2AO43633 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.92■□□□□ 0.78
CHMP2AO43633 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP2AO43633 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP2AO43633 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP2AO43633 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP2AO43633 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP2AO43633 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP2AO43633 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP2AO43633 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.91■□□□□ 0.78
CHMP2AO43633 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP2AO43633 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP2AO43633 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP2AO43633 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
CHMP2AO43633 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP2AO43633 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CHMP2AO43633 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP2AO43633 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP2AO43633 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.91■□□□□ 0.78
CHMP2AO43633 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP2AO43633 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP2AO43633 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP2AO43633 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CHMP2AO43633 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP2AO43633 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP2AO43633 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CHMP2AO43633 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP2AO43633 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP2AO43633 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CHMP2AO43633 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CHMP2AO43633 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP2AO43633 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP2AO43633 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP2AO43633 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.9■□□□□ 0.78
CHMP2AO43633 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP2AO43633 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CHMP2AO43633 NOC2LP1-202ENST00000452600 2235 ntBASIC19.9■□□□□ 0.78
CHMP2AO43633 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP2AO43633 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP2AO43633 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP2AO43633 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.9■□□□□ 0.78
CHMP2AO43633 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP2AO43633 COX5BP2-201ENST00000392354 334 ntBASIC19.9■□□□□ 0.78
CHMP2AO43633 FAAHP1-202ENST00000446499 1238 ntBASIC19.9■□□□□ 0.78
CHMP2AO43633 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.9■□□□□ 0.78
CHMP2AO43633 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.9■□□□□ 0.78
CHMP2AO43633 AC008608.2-201ENST00000606089 416 ntBASIC19.9■□□□□ 0.78
CHMP2AO43633 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.9■□□□□ 0.78
CHMP2AO43633 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.9■□□□□ 0.78
CHMP2AO43633 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CHMP2AO43633 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP2AO43633 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP2AO43633 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CHMP2AO43633 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP2AO43633 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP2AO43633 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP2AO43633 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP2AO43633 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP2AO43633 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP2AO43633 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.9■□□□□ 0.78
CHMP2AO43633 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP2AO43633 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.89■□□□□ 0.78
CHMP2AO43633 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
CHMP2AO43633 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.89■□□□□ 0.77
CHMP2AO43633 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP2AO43633 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP2AO43633 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP2AO43633 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.89■□□□□ 0.77
CHMP2AO43633 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP2AO43633 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP2AO43633 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.89■□□□□ 0.77
CHMP2AO43633 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.89■□□□□ 0.77
CHMP2AO43633 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP2AO43633 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.89■□□□□ 0.77
CHMP2AO43633 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP2AO43633 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.89■□□□□ 0.77
CHMP2AO43633 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms