Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AC024243.1-201ENST00000609234 778 ntBASIC17.99■□□□□ 0.47
RIPK2O43353 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RIPK2O43353 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RIPK2O43353 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RIPK2O43353 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RIPK2O43353 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RIPK2O43353 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.99■□□□□ 0.47
RIPK2O43353 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.99■□□□□ 0.47
RIPK2O43353 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RIPK2O43353 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RIPK2O43353 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RIPK2O43353 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RIPK2O43353 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RIPK2O43353 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
RIPK2O43353 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RIPK2O43353 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RIPK2O43353 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RIPK2O43353 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.98■□□□□ 0.47
RIPK2O43353 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RIPK2O43353 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RIPK2O43353 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
RIPK2O43353 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RIPK2O43353 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RIPK2O43353 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RIPK2O43353 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RIPK2O43353 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.98■□□□□ 0.47
RIPK2O43353 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RIPK2O43353 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RIPK2O43353 AC113404.2-201ENST00000507884 177 ntBASIC17.98■□□□□ 0.47
RIPK2O43353 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.98■□□□□ 0.47
RIPK2O43353 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.98■□□□□ 0.47
RIPK2O43353 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.98■□□□□ 0.47
RIPK2O43353 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RIPK2O43353 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.98■□□□□ 0.47
RIPK2O43353 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RIPK2O43353 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RIPK2O43353 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RIPK2O43353 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.98■□□□□ 0.47
RIPK2O43353 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.98■□□□□ 0.47
RIPK2O43353 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.98■□□□□ 0.47
RIPK2O43353 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
RIPK2O43353 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.98■□□□□ 0.47
RIPK2O43353 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RIPK2O43353 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RIPK2O43353 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.98■□□□□ 0.47
RIPK2O43353 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RIPK2O43353 AC046185.3-201ENST00000623228 1824 ntBASIC17.98■□□□□ 0.47
RIPK2O43353 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RIPK2O43353 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RIPK2O43353 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.97■□□□□ 0.47
RIPK2O43353 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RIPK2O43353 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RIPK2O43353 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RIPK2O43353 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RIPK2O43353 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RIPK2O43353 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RIPK2O43353 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RIPK2O43353 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RIPK2O43353 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RIPK2O43353 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.97■□□□□ 0.47
RIPK2O43353 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RIPK2O43353 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RIPK2O43353 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.97■□□□□ 0.47
RIPK2O43353 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
RIPK2O43353 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.97■□□□□ 0.47
RIPK2O43353 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.97■□□□□ 0.47
RIPK2O43353 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.97■□□□□ 0.47
RIPK2O43353 AC005104.2-201ENST00000427818 678 ntBASIC17.97■□□□□ 0.47
RIPK2O43353 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RIPK2O43353 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RIPK2O43353 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.97■□□□□ 0.47
RIPK2O43353 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.97■□□□□ 0.47
RIPK2O43353 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.97■□□□□ 0.47
RIPK2O43353 MIR3917-201ENST00000580971 93 ntBASIC17.97■□□□□ 0.47
RIPK2O43353 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.97■□□□□ 0.47
RIPK2O43353 AC026471.5-201ENST00000615068 467 ntBASIC17.97■□□□□ 0.47
RIPK2O43353 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
RIPK2O43353 AL049637.2-201ENST00000641778 930 ntBASIC17.97■□□□□ 0.47
RIPK2O43353 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RIPK2O43353 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RIPK2O43353 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RIPK2O43353 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
RIPK2O43353 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RIPK2O43353 PKD1P1-201ENST00000458669 6805 ntBASIC17.97■□□□□ 0.47
RIPK2O43353 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.97■□□□□ 0.47
RIPK2O43353 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
RIPK2O43353 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RIPK2O43353 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.97■□□□□ 0.47
RIPK2O43353 LINC01311-201ENST00000565162 1445 ntBASIC17.97■□□□□ 0.47
RIPK2O43353 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RIPK2O43353 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RIPK2O43353 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RIPK2O43353 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
RIPK2O43353 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.96■□□□□ 0.47
RIPK2O43353 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
RIPK2O43353 AL603756.1-201ENST00000606511 2163 ntBASIC17.96■□□□□ 0.47
RIPK2O43353 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.96■□□□□ 0.47
RIPK2O43353 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RIPK2O43353 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RIPK2O43353 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms