Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC113347.1-201ENST00000413321 391 ntBASIC17.63■□□□□ 0.41
PHGDHO43175 AL137013.1-201ENST00000432946 1228 ntBASIC17.63■□□□□ 0.41
PHGDHO43175 DDX43P3-201ENST00000441064 443 ntBASIC17.63■□□□□ 0.41
PHGDHO43175 YBX1P2-201ENST00000489612 999 ntBASIC17.63■□□□□ 0.41
PHGDHO43175 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHGDHO43175 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
PHGDHO43175 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHGDHO43175 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
PHGDHO43175 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHGDHO43175 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHGDHO43175 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHGDHO43175 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PHGDHO43175 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHGDHO43175 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.63■□□□□ 0.41
PHGDHO43175 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.63■□□□□ 0.41
PHGDHO43175 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.63■□□□□ 0.41
PHGDHO43175 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.63■□□□□ 0.41
PHGDHO43175 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHGDHO43175 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.63■□□□□ 0.41
PHGDHO43175 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
PHGDHO43175 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHGDHO43175 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.63■□□□□ 0.41
PHGDHO43175 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.62■□□□□ 0.41
PHGDHO43175 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.62■□□□□ 0.41
PHGDHO43175 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
PHGDHO43175 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
PHGDHO43175 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHGDHO43175 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PHGDHO43175 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHGDHO43175 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHGDHO43175 AD000864.1-201ENST00000624076 2295 ntBASIC17.62■□□□□ 0.41
PHGDHO43175 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHGDHO43175 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHGDHO43175 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHGDHO43175 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHGDHO43175 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PHGDHO43175 STARP1-201ENST00000397973 869 ntBASIC17.62■□□□□ 0.41
PHGDHO43175 TSPY12P-201ENST00000421279 868 ntBASIC17.62■□□□□ 0.41
PHGDHO43175 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PHGDHO43175 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.62■□□□□ 0.41
PHGDHO43175 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.62■□□□□ 0.41
PHGDHO43175 AC012306.2-201ENST00000609350 630 ntBASIC17.62■□□□□ 0.41
PHGDHO43175 AC005363.2-201ENST00000618631 242 ntBASIC17.62■□□□□ 0.41
PHGDHO43175 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.62■□□□□ 0.41
PHGDHO43175 AC009154.2-201ENST00000621177 724 ntBASIC17.62■□□□□ 0.41
PHGDHO43175 LINC01451-201ENST00000623792 534 ntBASIC17.62■□□□□ 0.41
PHGDHO43175 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.62■□□□□ 0.41
PHGDHO43175 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.62■□□□□ 0.41
PHGDHO43175 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
PHGDHO43175 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.62■□□□□ 0.41
PHGDHO43175 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.62■□□□□ 0.41
PHGDHO43175 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PHGDHO43175 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHGDHO43175 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PHGDHO43175 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.62■□□□□ 0.41
PHGDHO43175 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PHGDHO43175 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.62■□□□□ 0.41
PHGDHO43175 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
PHGDHO43175 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHGDHO43175 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHGDHO43175 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.62■□□□□ 0.41
PHGDHO43175 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHGDHO43175 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHGDHO43175 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PHGDHO43175 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PHGDHO43175 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PHGDHO43175 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PHGDHO43175 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PHGDHO43175 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PHGDHO43175 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.61■□□□□ 0.41
PHGDHO43175 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.61■□□□□ 0.41
PHGDHO43175 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
PHGDHO43175 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PHGDHO43175 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PHGDHO43175 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PHGDHO43175 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PHGDHO43175 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PHGDHO43175 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PHGDHO43175 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
PHGDHO43175 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PHGDHO43175 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PHGDHO43175 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PHGDHO43175 AC117947.1-201ENST00000427448 529 ntBASIC17.61■□□□□ 0.41
PHGDHO43175 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.61■□□□□ 0.41
PHGDHO43175 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PHGDHO43175 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PHGDHO43175 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.61■□□□□ 0.41
PHGDHO43175 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.61■□□□□ 0.41
PHGDHO43175 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PHGDHO43175 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PHGDHO43175 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PHGDHO43175 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PHGDHO43175 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PHGDHO43175 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PHGDHO43175 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PHGDHO43175 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
PHGDHO43175 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PHGDHO43175 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PHGDHO43175 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PHGDHO43175 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms