Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 AC145285.6-201ENST00000604632 637 ntBASIC16.86■□□□□ 0.29
CLOCKO15516 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.86■□□□□ 0.29
CLOCKO15516 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.86■□□□□ 0.29
CLOCKO15516 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CLOCKO15516 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CLOCKO15516 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
CLOCKO15516 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLOCKO15516 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLOCKO15516 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CLOCKO15516 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLOCKO15516 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLOCKO15516 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CLOCKO15516 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLOCKO15516 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLOCKO15516 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLOCKO15516 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
CLOCKO15516 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
CLOCKO15516 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CLOCKO15516 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.85■□□□□ 0.29
CLOCKO15516 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLOCKO15516 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLOCKO15516 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLOCKO15516 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.85■□□□□ 0.29
CLOCKO15516 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLOCKO15516 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLOCKO15516 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLOCKO15516 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.85■□□□□ 0.29
CLOCKO15516 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.85■□□□□ 0.29
CLOCKO15516 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLOCKO15516 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.85■□□□□ 0.29
CLOCKO15516 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLOCKO15516 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLOCKO15516 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
CLOCKO15516 MESTP1-201ENST00000404287 994 ntBASIC16.85■□□□□ 0.29
CLOCKO15516 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.85■□□□□ 0.29
CLOCKO15516 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.85■□□□□ 0.29
CLOCKO15516 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLOCKO15516 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
CLOCKO15516 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.85■□□□□ 0.29
CLOCKO15516 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.85■□□□□ 0.29
CLOCKO15516 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.85■□□□□ 0.29
CLOCKO15516 AP000692.2-201ENST00000608391 879 ntBASIC16.85■□□□□ 0.29
CLOCKO15516 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLOCKO15516 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLOCKO15516 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.85■□□□□ 0.29
CLOCKO15516 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CLOCKO15516 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.85■□□□□ 0.29
CLOCKO15516 PCDH8P1-201ENST00000428983 2773 ntBASIC16.85■□□□□ 0.29
CLOCKO15516 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLOCKO15516 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLOCKO15516 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLOCKO15516 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.85■□□□□ 0.29
CLOCKO15516 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLOCKO15516 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.85■□□□□ 0.29
CLOCKO15516 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
CLOCKO15516 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CLOCKO15516 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLOCKO15516 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLOCKO15516 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLOCKO15516 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLOCKO15516 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLOCKO15516 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLOCKO15516 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLOCKO15516 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.84■□□□□ 0.29
CLOCKO15516 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.84■□□□□ 0.29
CLOCKO15516 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLOCKO15516 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.84■□□□□ 0.29
CLOCKO15516 RN7SL850P-201ENST00000579959 291 ntBASIC16.84■□□□□ 0.29
CLOCKO15516 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLOCKO15516 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CLOCKO15516 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLOCKO15516 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLOCKO15516 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.84■□□□□ 0.29
CLOCKO15516 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLOCKO15516 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLOCKO15516 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.84■□□□□ 0.29
CLOCKO15516 CYP2D8P-201ENST00000433633 1490 ntBASIC16.84■□□□□ 0.29
CLOCKO15516 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.84■□□□□ 0.29
CLOCKO15516 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLOCKO15516 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.84■□□□□ 0.29
CLOCKO15516 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLOCKO15516 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLOCKO15516 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLOCKO15516 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLOCKO15516 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.84■□□□□ 0.29
CLOCKO15516 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CLOCKO15516 MST1L-201ENST00000442552 2185 ntBASIC16.84■□□□□ 0.29
CLOCKO15516 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CLOCKO15516 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.84■□□□□ 0.29
CLOCKO15516 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLOCKO15516 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLOCKO15516 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.83■□□□□ 0.28
CLOCKO15516 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
CLOCKO15516 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
CLOCKO15516 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLOCKO15516 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLOCKO15516 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.83■□□□□ 0.28
CLOCKO15516 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLOCKO15516 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
CLOCKO15516 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms