Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXN1O15353 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
FOXN1O15353 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXN1O15353 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.09■□□□□ 0.97
FOXN1O15353 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXN1O15353 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXN1O15353 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXN1O15353 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FOXN1O15353 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXN1O15353 CD276-201ENST00000318424 2738 ntTSL 5 BASIC21.09■□□□□ 0.97
FOXN1O15353 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXN1O15353 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FOXN1O15353 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXN1O15353 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXN1O15353 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
FOXN1O15353 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC21.09■□□□□ 0.97
FOXN1O15353 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC21.09■□□□□ 0.97
FOXN1O15353 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.09■□□□□ 0.97
FOXN1O15353 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXN1O15353 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC21.09■□□□□ 0.97
FOXN1O15353 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC21.09■□□□□ 0.97
FOXN1O15353 CYGB-205ENST00000590175 830 ntTSL 3 BASIC21.09■□□□□ 0.97
FOXN1O15353 AC011467.2-201ENST00000598425 242 ntBASIC21.09■□□□□ 0.97
FOXN1O15353 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.09■□□□□ 0.97
FOXN1O15353 MIR6752-201ENST00000618442 71 ntBASIC21.09■□□□□ 0.97
FOXN1O15353 AC005593.1-201ENST00000624894 515 ntBASIC21.09■□□□□ 0.97
FOXN1O15353 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FOXN1O15353 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
FOXN1O15353 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.09■□□□□ 0.97
FOXN1O15353 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FOXN1O15353 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXN1O15353 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
FOXN1O15353 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXN1O15353 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.09■□□□□ 0.97
FOXN1O15353 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
FOXN1O15353 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FOXN1O15353 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXN1O15353 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXN1O15353 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
FOXN1O15353 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
FOXN1O15353 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.08■□□□□ 0.97
FOXN1O15353 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
FOXN1O15353 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
FOXN1O15353 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
FOXN1O15353 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.08■□□□□ 0.97
FOXN1O15353 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
FOXN1O15353 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
FOXN1O15353 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
FOXN1O15353 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
FOXN1O15353 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
FOXN1O15353 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
FOXN1O15353 PMS2P4-201ENST00000412466 1052 ntBASIC21.08■□□□□ 0.97
FOXN1O15353 SLC4A1APP2-201ENST00000424054 1259 ntBASIC21.08■□□□□ 0.97
FOXN1O15353 MSRA-206ENST00000521209 814 ntTSL 3 BASIC21.08■□□□□ 0.97
FOXN1O15353 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC21.08■□□□□ 0.97
FOXN1O15353 TCAP-202ENST00000578283 583 ntTSL 5 BASIC21.08■□□□□ 0.97
FOXN1O15353 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC21.08■□□□□ 0.97
FOXN1O15353 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
FOXN1O15353 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.08■□□□□ 0.97
FOXN1O15353 AP000867.4-201ENST00000641616 219 ntBASIC21.08■□□□□ 0.97
FOXN1O15353 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC21.08■□□□□ 0.96
FOXN1O15353 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.08■□□□□ 0.96
FOXN1O15353 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
FOXN1O15353 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
FOXN1O15353 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
FOXN1O15353 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
FOXN1O15353 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.08■□□□□ 0.96
FOXN1O15353 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
FOXN1O15353 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC21.08■□□□□ 0.96
FOXN1O15353 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.08■□□□□ 0.96
FOXN1O15353 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
FOXN1O15353 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC21.07■□□□□ 0.96
FOXN1O15353 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
FOXN1O15353 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
FOXN1O15353 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
FOXN1O15353 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FOXN1O15353 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FOXN1O15353 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
FOXN1O15353 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.07■□□□□ 0.96
FOXN1O15353 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
FOXN1O15353 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
FOXN1O15353 DANCR-204ENST00000444958 709 ntTSL 3 BASIC21.07■□□□□ 0.96
FOXN1O15353 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
FOXN1O15353 AP000344.2-201ENST00000512987 629 ntBASIC21.07■□□□□ 0.96
FOXN1O15353 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC21.07■□□□□ 0.96
FOXN1O15353 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
FOXN1O15353 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC21.07■□□□□ 0.96
FOXN1O15353 AC018845.2-201ENST00000568326 409 ntBASIC21.07■□□□□ 0.96
FOXN1O15353 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC21.07■□□□□ 0.96
FOXN1O15353 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC21.07■□□□□ 0.96
FOXN1O15353 AL390955.2-201ENST00000603032 514 ntBASIC21.07■□□□□ 0.96
FOXN1O15353 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.07■□□□□ 0.96
FOXN1O15353 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FOXN1O15353 RCC2P3-201ENST00000418112 1537 ntBASIC21.07■□□□□ 0.96
FOXN1O15353 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC21.07■□□□□ 0.96
FOXN1O15353 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FOXN1O15353 GOLGA6L17P-202ENST00000614358 1398 ntBASIC21.07■□□□□ 0.96
FOXN1O15353 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.07■□□□□ 0.96
FOXN1O15353 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC21.07■□□□□ 0.96
FOXN1O15353 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms