Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TO15178 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TO15178 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TO15178 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TO15178 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TO15178 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TO15178 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TO15178 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TO15178 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TO15178 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
TO15178 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TO15178 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TO15178 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TO15178 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TO15178 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TO15178 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TO15178 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TO15178 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TO15178 TSPY19P-201ENST00000418461 509 ntBASIC16.3■□□□□ 0.2
TO15178 TSPY18P-201ENST00000441642 509 ntBASIC16.3■□□□□ 0.2
TO15178 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.3■□□□□ 0.2
TO15178 FOSL1P1-201ENST00000511041 816 ntBASIC16.3■□□□□ 0.2
TO15178 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.3■□□□□ 0.2
TO15178 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.3■□□□□ 0.2
TO15178 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.3■□□□□ 0.2
TO15178 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.3■□□□□ 0.2
TO15178 CLEC4GP1-201ENST00000596555 870 ntBASIC16.3■□□□□ 0.2
TO15178 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TO15178 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TO15178 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.3■□□□□ 0.2
TO15178 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TO15178 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.3■□□□□ 0.2
TO15178 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
TO15178 AC012313.1-201ENST00000593393 3059 ntBASIC16.3■□□□□ 0.2
TO15178 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TO15178 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TO15178 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TO15178 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.29■□□□□ 0.2
TO15178 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TO15178 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.29■□□□□ 0.2
TO15178 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TO15178 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TO15178 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TO15178 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TO15178 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TO15178 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TO15178 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.29■□□□□ 0.2
TO15178 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.29■□□□□ 0.2
TO15178 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TO15178 PRELID1P1-202ENST00000567272 903 ntBASIC16.29■□□□□ 0.2
TO15178 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.29■□□□□ 0.2
TO15178 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.29■□□□□ 0.2
TO15178 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.29■□□□□ 0.2
TO15178 AC019129.2-201ENST00000609837 1235 ntBASIC16.29■□□□□ 0.2
TO15178 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.29■□□□□ 0.2
TO15178 AC133963.1-201ENST00000504166 1679 ntBASIC16.29■□□□□ 0.2
TO15178 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TO15178 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TO15178 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TO15178 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.29■□□□□ 0.2
TO15178 BCL2-203ENST00000589955 5011 ntBASIC16.28■□□□□ 0.2
TO15178 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TO15178 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.28■□□□□ 0.2
TO15178 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TO15178 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.28■□□□□ 0.2
TO15178 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TO15178 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TO15178 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TO15178 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TO15178 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.28■□□□□ 0.2
TO15178 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TO15178 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TO15178 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TO15178 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.28■□□□□ 0.2
TO15178 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TO15178 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TO15178 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
TO15178 HLA-J-201ENST00000462773 1622 ntBASIC16.28■□□□□ 0.2
TO15178 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TO15178 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TO15178 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TO15178 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TO15178 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TO15178 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TO15178 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TO15178 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TO15178 NUS1P2-201ENST00000417358 873 ntBASIC16.28■□□□□ 0.2
TO15178 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.28■□□□□ 0.2
TO15178 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.28■□□□□ 0.2
TO15178 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TO15178 AC138894.3-201ENST00000603787 634 ntBASIC16.28■□□□□ 0.2
TO15178 AL591684.3-201ENST00000605187 298 ntBASIC16.28■□□□□ 0.2
TO15178 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.28■□□□□ 0.2
TO15178 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TO15178 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
TO15178 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TO15178 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TO15178 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TO15178 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.28■□□□□ 0.2
TO15178 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms