Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2A1O14983 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2A1O14983 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2A1O14983 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.21■□□□□ 0.83
ATP2A1O14983 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2A1O14983 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2A1O14983 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2A1O14983 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2A1O14983 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.21■□□□□ 0.83
ATP2A1O14983 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
ATP2A1O14983 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2A1O14983 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2A1O14983 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.21■□□□□ 0.83
ATP2A1O14983 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
ATP2A1O14983 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
ATP2A1O14983 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
ATP2A1O14983 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
ATP2A1O14983 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2A1O14983 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.2■□□□□ 0.82
ATP2A1O14983 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.2■□□□□ 0.82
ATP2A1O14983 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.2■□□□□ 0.82
ATP2A1O14983 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2A1O14983 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ATP2A1O14983 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.2■□□□□ 0.82
ATP2A1O14983 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.2■□□□□ 0.82
ATP2A1O14983 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.2■□□□□ 0.82
ATP2A1O14983 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.2■□□□□ 0.82
ATP2A1O14983 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.2■□□□□ 0.82
ATP2A1O14983 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.2■□□□□ 0.82
ATP2A1O14983 STK25P1-201ENST00000585406 838 ntBASIC20.2■□□□□ 0.82
ATP2A1O14983 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.2■□□□□ 0.82
ATP2A1O14983 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2A1O14983 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.2■□□□□ 0.82
ATP2A1O14983 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.2■□□□□ 0.82
ATP2A1O14983 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.2■□□□□ 0.82
ATP2A1O14983 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.2■□□□□ 0.82
ATP2A1O14983 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
ATP2A1O14983 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
ATP2A1O14983 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2A1O14983 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.2■□□□□ 0.82
ATP2A1O14983 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2A1O14983 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2A1O14983 AC093503.3-201ENST00000624917 2352 ntBASIC20.2■□□□□ 0.82
ATP2A1O14983 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.19■□□□□ 0.82
ATP2A1O14983 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2A1O14983 NCF1C-201ENST00000438382 1427 ntBASIC20.19■□□□□ 0.82
ATP2A1O14983 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2A1O14983 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2A1O14983 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ATP2A1O14983 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2A1O14983 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.19■□□□□ 0.82
ATP2A1O14983 AC009949.1-201ENST00000623048 1830 ntBASIC20.19■□□□□ 0.82
ATP2A1O14983 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2A1O14983 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2A1O14983 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2A1O14983 RNA5SP416-201ENST00000516838 111 ntBASIC20.19■□□□□ 0.82
ATP2A1O14983 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
ATP2A1O14983 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.19■□□□□ 0.82
ATP2A1O14983 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.19■□□□□ 0.82
ATP2A1O14983 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.19■□□□□ 0.82
ATP2A1O14983 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.19■□□□□ 0.82
ATP2A1O14983 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.19■□□□□ 0.82
ATP2A1O14983 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2A1O14983 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2A1O14983 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
ATP2A1O14983 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2A1O14983 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2A1O14983 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
ATP2A1O14983 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2A1O14983 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.19■□□□□ 0.82
ATP2A1O14983 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2A1O14983 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2A1O14983 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2A1O14983 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2A1O14983 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.19■□□□□ 0.82
ATP2A1O14983 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATP2A1O14983 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.18■□□□□ 0.82
ATP2A1O14983 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATP2A1O14983 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.18■□□□□ 0.82
ATP2A1O14983 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP2A1O14983 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ATP2A1O14983 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
ATP2A1O14983 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP2A1O14983 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP2A1O14983 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ATP2A1O14983 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP2A1O14983 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
ATP2A1O14983 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.18■□□□□ 0.82
ATP2A1O14983 AC004832.2-201ENST00000426397 482 ntBASIC20.18■□□□□ 0.82
ATP2A1O14983 AC005104.2-201ENST00000427818 678 ntBASIC20.18■□□□□ 0.82
ATP2A1O14983 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATP2A1O14983 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.18■□□□□ 0.82
ATP2A1O14983 AC109462.3-201ENST00000573934 613 ntBASIC20.18■□□□□ 0.82
ATP2A1O14983 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
ATP2A1O14983 AC004408.2-201ENST00000623613 2777 ntBASIC20.18■□□□□ 0.82
ATP2A1O14983 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.18■□□□□ 0.82
ATP2A1O14983 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP2A1O14983 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP2A1O14983 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.18■□□□□ 0.82
ATP2A1O14983 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms