Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CCL21O00585 PTCHD3P3-201ENST00000403073 906 ntBASIC15.53■□□□□ 0.08
CCL21O00585 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.53■□□□□ 0.08
CCL21O00585 IGLL3P-201ENST00000412472 434 ntBASIC15.53■□□□□ 0.08
CCL21O00585 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.53■□□□□ 0.08
CCL21O00585 FAM58CP-201ENST00000435741 640 ntBASIC15.53■□□□□ 0.08
CCL21O00585 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCL21O00585 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.53■□□□□ 0.08
CCL21O00585 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL21O00585 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.53■□□□□ 0.08
CCL21O00585 IGHV3-52-201ENST00000519770 353 ntBASIC15.53■□□□□ 0.08
CCL21O00585 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.53■□□□□ 0.08
CCL21O00585 KRT19P2-202ENST00000557173 1012 ntBASIC15.53■□□□□ 0.08
CCL21O00585 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.53■□□□□ 0.08
CCL21O00585 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL21O00585 AC116407.2-201ENST00000613639 860 ntBASIC15.53■□□□□ 0.08
CCL21O00585 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.53■□□□□ 0.08
CCL21O00585 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.53■□□□□ 0.08
CCL21O00585 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CCL21O00585 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL21O00585 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CCL21O00585 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CCL21O00585 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL21O00585 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL21O00585 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCL21O00585 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.53■□□□□ 0.08
CCL21O00585 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CCL21O00585 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CCL21O00585 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCL21O00585 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCL21O00585 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCL21O00585 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCL21O00585 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCL21O00585 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CCL21O00585 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCL21O00585 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CCL21O00585 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCL21O00585 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCL21O00585 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCL21O00585 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCL21O00585 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCL21O00585 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCL21O00585 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCL21O00585 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCL21O00585 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCL21O00585 TSEN15P1-201ENST00000423257 515 ntBASIC15.52■□□□□ 0.08
CCL21O00585 ACTG1P14-201ENST00000446382 1122 ntBASIC15.52■□□□□ 0.08
CCL21O00585 AC074386.1-202ENST00000463561 864 ntBASIC15.52■□□□□ 0.08
CCL21O00585 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CCL21O00585 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.52■□□□□ 0.08
CCL21O00585 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCL21O00585 AC004449.1-201ENST00000564240 433 ntBASIC15.52■□□□□ 0.08
CCL21O00585 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.52■□□□□ 0.08
CCL21O00585 AC007064.4-201ENST00000637740 555 ntBASIC15.52■□□□□ 0.08
CCL21O00585 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
CCL21O00585 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.52■□□□□ 0.08
CCL21O00585 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CCL21O00585 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.52■□□□□ 0.07
CCL21O00585 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCL21O00585 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCL21O00585 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CCL21O00585 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CCL21O00585 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCL21O00585 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCL21O00585 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.51■□□□□ 0.07
CCL21O00585 AC025580.3-201ENST00000617932 1424 ntBASIC15.51■□□□□ 0.07
CCL21O00585 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
CCL21O00585 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC15.51■□□□□ 0.07
CCL21O00585 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCL21O00585 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CCL21O00585 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCL21O00585 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCL21O00585 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCL21O00585 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCL21O00585 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCL21O00585 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CCL21O00585 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
CCL21O00585 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCL21O00585 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.51■□□□□ 0.07
CCL21O00585 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.51■□□□□ 0.07
CCL21O00585 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC15.51■□□□□ 0.07
CCL21O00585 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCL21O00585 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCL21O00585 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCL21O00585 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCL21O00585 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCL21O00585 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCL21O00585 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.51■□□□□ 0.07
CCL21O00585 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.51■□□□□ 0.07
CCL21O00585 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.51■□□□□ 0.07
CCL21O00585 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCL21O00585 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.51■□□□□ 0.07
CCL21O00585 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
CCL21O00585 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.51■□□□□ 0.07
CCL21O00585 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.51■□□□□ 0.07
CCL21O00585 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.51■□□□□ 0.07
CCL21O00585 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CCL21O00585 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.51■□□□□ 0.07
CCL21O00585 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CCL21O00585 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms