Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.14■□□□□ 0.17
NPIPA3F8WFD2 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.14■□□□□ 0.17
NPIPA3F8WFD2 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.14■□□□□ 0.17
NPIPA3F8WFD2 AL138831.2-201ENST00000606564 490 ntBASIC16.14■□□□□ 0.17
NPIPA3F8WFD2 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.14■□□□□ 0.17
NPIPA3F8WFD2 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.14■□□□□ 0.17
NPIPA3F8WFD2 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA3F8WFD2 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA3F8WFD2 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.14■□□□□ 0.17
NPIPA3F8WFD2 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
NPIPA3F8WFD2 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA3F8WFD2 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.14■□□□□ 0.17
NPIPA3F8WFD2 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA3F8WFD2 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA3F8WFD2 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA3F8WFD2 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA3F8WFD2 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA3F8WFD2 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 AC125634.1-201ENST00000438758 1403 ntBASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 AL590627.1-203ENST00000421194 1026 ntBASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 AF186996.4-201ENST00000467186 377 ntBASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 AC112698.1-201ENST00000510299 916 ntBASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 AP001005.1-201ENST00000571755 1248 ntBASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 MTDHP3-201ENST00000594186 672 ntBASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 AC120114.3-201ENST00000611923 658 ntBASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 AL773604.1-201ENST00000617417 272 ntBASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
NPIPA3F8WFD2 CROCCP1-201ENST00000426910 5675 ntBASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 AC138028.4-201ENST00000564984 1845 ntBASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 FLJ13224-201ENST00000313737 1514 ntBASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA3F8WFD2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms