Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 AC010240.3-201ENST00000607688 395 ntBASIC15.14■□□□□ 0.01
TMEM235A6NFC5 MMD2-204ENST00000612910 778 ntTSL 5 BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 AC116407.2-201ENST00000613639 860 ntBASIC15.14■□□□□ 0.01
TMEM235A6NFC5 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM235A6NFC5 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TMEM235A6NFC5 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM235A6NFC5 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TMEM235A6NFC5 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM235A6NFC5 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM235A6NFC5 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM235A6NFC5 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC15.13■□□□□ 0.01
TMEM235A6NFC5 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM235A6NFC5 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM235A6NFC5 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TMEM235A6NFC5 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM235A6NFC5 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.13■□□□□ 0.01
TMEM235A6NFC5 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TMEM235A6NFC5 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM235A6NFC5 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TMEM235A6NFC5 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM235A6NFC5 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM235A6NFC5 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TMEM235A6NFC5 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM235A6NFC5 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM235A6NFC5 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
TMEM235A6NFC5 AC060834.1-201ENST00000443027 2032 ntBASIC15.13■□□□□ 0.01
TMEM235A6NFC5 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.13■□□□□ 0.01
TMEM235A6NFC5 LINC00167-201ENST00000530583 1419 ntBASIC15.13■□□□□ 0.01
TMEM235A6NFC5 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.13■□□□□ 0.01
TMEM235A6NFC5 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM235A6NFC5 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM235A6NFC5 AC092666.2-201ENST00000613287 246 ntBASIC15.13■□□□□ 0.01
TMEM235A6NFC5 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM235A6NFC5 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.13■□□□□ 0.01
TMEM235A6NFC5 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.13■□□□□ 0.01
TMEM235A6NFC5 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM235A6NFC5 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TMEM235A6NFC5 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TMEM235A6NFC5 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TMEM235A6NFC5 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM235A6NFC5 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.13■□□□□ 0.01
TMEM235A6NFC5 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM235A6NFC5 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM235A6NFC5 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM235A6NFC5 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.12■□□□□ 0.01
TMEM235A6NFC5 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
TMEM235A6NFC5 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM235A6NFC5 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TMEM235A6NFC5 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM235A6NFC5 PCDH8P1-201ENST00000428983 2773 ntBASIC15.12■□□□□ 0.01
TMEM235A6NFC5 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TMEM235A6NFC5 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM235A6NFC5 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM235A6NFC5 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.12■□□□□ 0.01
TMEM235A6NFC5 ID1-201ENST00000376105 1233 ntBASIC15.12■□□□□ 0.01
TMEM235A6NFC5 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
TMEM235A6NFC5 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TMEM235A6NFC5 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
TMEM235A6NFC5 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM235A6NFC5 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC15.12■□□□□ 0.01
TMEM235A6NFC5 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.12■□□□□ 0.01
TMEM235A6NFC5 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.12■□□□□ 0.01
TMEM235A6NFC5 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms