Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.61■□□□□ 0.41
TBC1D3FA6NER0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TBC1D3FA6NER0 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.61■□□□□ 0.41
TBC1D3FA6NER0 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TBC1D3FA6NER0 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TBC1D3FA6NER0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TBC1D3FA6NER0 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TBC1D3FA6NER0 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.61■□□□□ 0.41
TBC1D3FA6NER0 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TBC1D3FA6NER0 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TBC1D3FA6NER0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3FA6NER0 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3FA6NER0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3FA6NER0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TBC1D3FA6NER0 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3FA6NER0 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3FA6NER0 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3FA6NER0 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3FA6NER0 AL020989.1-201ENST00000422979 469 ntBASIC17.6■□□□□ 0.41
TBC1D3FA6NER0 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.6■□□□□ 0.41
TBC1D3FA6NER0 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
TBC1D3FA6NER0 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
TBC1D3FA6NER0 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.6■□□□□ 0.41
TBC1D3FA6NER0 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.6■□□□□ 0.41
TBC1D3FA6NER0 Z83851.2-201ENST00000609564 659 ntBASIC17.6■□□□□ 0.41
TBC1D3FA6NER0 AC027601.4-201ENST00000611259 610 ntBASIC17.6■□□□□ 0.41
TBC1D3FA6NER0 MIR1199-201ENST00000621445 119 ntBASIC17.6■□□□□ 0.41
TBC1D3FA6NER0 AC073592.4-201ENST00000623827 446 ntBASIC17.6■□□□□ 0.41
TBC1D3FA6NER0 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3FA6NER0 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3FA6NER0 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3FA6NER0 SIGLEC16-201ENST00000599858 1437 ntBASIC17.6■□□□□ 0.41
TBC1D3FA6NER0 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3FA6NER0 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3FA6NER0 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.6■□□□□ 0.41
TBC1D3FA6NER0 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3FA6NER0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3FA6NER0 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
TBC1D3FA6NER0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3FA6NER0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.6■□□□□ 0.41
TBC1D3FA6NER0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3FA6NER0 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3FA6NER0 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3FA6NER0 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.6■□□□□ 0.41
TBC1D3FA6NER0 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
TBC1D3FA6NER0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3FA6NER0 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3FA6NER0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TBC1D3FA6NER0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.59■□□□□ 0.41
TBC1D3FA6NER0 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
TBC1D3FA6NER0 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TBC1D3FA6NER0 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TBC1D3FA6NER0 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TBC1D3FA6NER0 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TBC1D3FA6NER0 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TBC1D3FA6NER0 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.59■□□□□ 0.41
TBC1D3FA6NER0 AL049757.1-201ENST00000616842 1596 ntBASIC17.59■□□□□ 0.41
TBC1D3FA6NER0 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TBC1D3FA6NER0 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TBC1D3FA6NER0 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TBC1D3FA6NER0 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TBC1D3FA6NER0 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.59■□□□□ 0.41
TBC1D3FA6NER0 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.59■□□□□ 0.41
TBC1D3FA6NER0 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.59■□□□□ 0.41
TBC1D3FA6NER0 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.59■□□□□ 0.41
TBC1D3FA6NER0 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.59■□□□□ 0.41
TBC1D3FA6NER0 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.59■□□□□ 0.41
TBC1D3FA6NER0 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.59■□□□□ 0.41
TBC1D3FA6NER0 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TBC1D3FA6NER0 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
TBC1D3FA6NER0 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TBC1D3FA6NER0 AP000997.3-201ENST00000623333 2250 ntBASIC17.59■□□□□ 0.41
TBC1D3FA6NER0 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TBC1D3FA6NER0 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.59■□□□□ 0.41
TBC1D3FA6NER0 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TBC1D3FA6NER0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
TBC1D3FA6NER0 AC009949.1-201ENST00000623048 1830 ntBASIC17.58■□□□□ 0.41
TBC1D3FA6NER0 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.58■□□□□ 0.41
TBC1D3FA6NER0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.58■□□□□ 0.41
TBC1D3FA6NER0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TBC1D3FA6NER0 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
TBC1D3FA6NER0 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TBC1D3FA6NER0 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TBC1D3FA6NER0 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TBC1D3FA6NER0 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TBC1D3FA6NER0 AL353593.2-201ENST00000602529 1483 ntBASIC17.58■□□□□ 0.41
TBC1D3FA6NER0 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
TBC1D3FA6NER0 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.58■□□□□ 0.4
TBC1D3FA6NER0 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TBC1D3FA6NER0 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TBC1D3FA6NER0 UNC93B6-202ENST00000528242 690 ntBASIC17.58■□□□□ 0.4
TBC1D3FA6NER0 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.58■□□□□ 0.4
TBC1D3FA6NER0 AC034105.1-201ENST00000563488 319 ntBASIC17.58■□□□□ 0.4
TBC1D3FA6NER0 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.58■□□□□ 0.4
TBC1D3FA6NER0 AC006557.2-201ENST00000592985 1240 ntBASIC17.58■□□□□ 0.4
TBC1D3FA6NER0 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.58■□□□□ 0.4
TBC1D3FA6NER0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TBC1D3FA6NER0 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TBC1D3FA6NER0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TBC1D3FA6NER0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms