Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.42■□□□□ 0.86
PALM3A6NDB9 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PALM3A6NDB9 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PALM3A6NDB9 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PALM3A6NDB9 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PALM3A6NDB9 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.41■□□□□ 0.86
PALM3A6NDB9 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
PALM3A6NDB9 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PALM3A6NDB9 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PALM3A6NDB9 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.41■□□□□ 0.86
PALM3A6NDB9 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PALM3A6NDB9 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.41■□□□□ 0.86
PALM3A6NDB9 SPDYE21P-201ENST00000413323 827 ntBASIC20.41■□□□□ 0.86
PALM3A6NDB9 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.41■□□□□ 0.86
PALM3A6NDB9 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PALM3A6NDB9 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.41■□□□□ 0.86
PALM3A6NDB9 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.41■□□□□ 0.86
PALM3A6NDB9 NKAPP1-205ENST00000585790 367 ntBASIC20.41■□□□□ 0.86
PALM3A6NDB9 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.41■□□□□ 0.86
PALM3A6NDB9 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PALM3A6NDB9 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.41■□□□□ 0.86
PALM3A6NDB9 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PALM3A6NDB9 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PALM3A6NDB9 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PALM3A6NDB9 AL356309.3-201ENST00000624132 1934 ntBASIC20.41■□□□□ 0.86
PALM3A6NDB9 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.41■□□□□ 0.86
PALM3A6NDB9 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PALM3A6NDB9 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PALM3A6NDB9 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PALM3A6NDB9 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.41■□□□□ 0.86
PALM3A6NDB9 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.4■□□□□ 0.86
PALM3A6NDB9 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
PALM3A6NDB9 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PALM3A6NDB9 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PALM3A6NDB9 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PALM3A6NDB9 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PALM3A6NDB9 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PALM3A6NDB9 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PALM3A6NDB9 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.4■□□□□ 0.86
PALM3A6NDB9 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PALM3A6NDB9 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PALM3A6NDB9 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PALM3A6NDB9 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.4■□□□□ 0.86
PALM3A6NDB9 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PALM3A6NDB9 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.4■□□□□ 0.86
PALM3A6NDB9 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
PALM3A6NDB9 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.4■□□□□ 0.86
PALM3A6NDB9 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.4■□□□□ 0.86
PALM3A6NDB9 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PALM3A6NDB9 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PALM3A6NDB9 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.4■□□□□ 0.86
PALM3A6NDB9 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
PALM3A6NDB9 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.39■□□□□ 0.86
PALM3A6NDB9 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
PALM3A6NDB9 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
PALM3A6NDB9 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.39■□□□□ 0.86
PALM3A6NDB9 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PALM3A6NDB9 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PALM3A6NDB9 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PALM3A6NDB9 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.39■□□□□ 0.85
PALM3A6NDB9 MRPL3P1-201ENST00000400109 1033 ntBASIC20.39■□□□□ 0.85
PALM3A6NDB9 FAM197Y8-203ENST00000450145 560 ntBASIC20.39■□□□□ 0.85
PALM3A6NDB9 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PALM3A6NDB9 IGHV3-52-201ENST00000519770 353 ntBASIC20.39■□□□□ 0.85
PALM3A6NDB9 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.39■□□□□ 0.85
PALM3A6NDB9 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.39■□□□□ 0.85
PALM3A6NDB9 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.39■□□□□ 0.85
PALM3A6NDB9 SLC25A6P4-201ENST00000586535 553 ntBASIC20.39■□□□□ 0.85
PALM3A6NDB9 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.39■□□□□ 0.85
PALM3A6NDB9 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PALM3A6NDB9 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.39■□□□□ 0.85
PALM3A6NDB9 AL139288.1-201ENST00000623748 933 ntBASIC20.39■□□□□ 0.85
PALM3A6NDB9 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.39■□□□□ 0.85
PALM3A6NDB9 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PALM3A6NDB9 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.39■□□□□ 0.85
PALM3A6NDB9 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
PALM3A6NDB9 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PALM3A6NDB9 AL355312.1-201ENST00000407115 2176 ntBASIC20.39■□□□□ 0.85
PALM3A6NDB9 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
PALM3A6NDB9 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PALM3A6NDB9 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PALM3A6NDB9 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
PALM3A6NDB9 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PALM3A6NDB9 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.38■□□□□ 0.85
PALM3A6NDB9 AC068880.1-201ENST00000507289 2297 ntBASIC20.38■□□□□ 0.85
PALM3A6NDB9 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PALM3A6NDB9 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.38■□□□□ 0.85
PALM3A6NDB9 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PALM3A6NDB9 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PALM3A6NDB9 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.38■□□□□ 0.85
PALM3A6NDB9 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
PALM3A6NDB9 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.38■□□□□ 0.85
PALM3A6NDB9 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PALM3A6NDB9 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.38■□□□□ 0.85
PALM3A6NDB9 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.38■□□□□ 0.85
PALM3A6NDB9 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
PALM3A6NDB9 AC021087.4-201ENST00000563761 564 ntBASIC20.38■□□□□ 0.85
PALM3A6NDB9 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.38■□□□□ 0.85
PALM3A6NDB9 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PALM3A6NDB9 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms