Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC11.74□□□□□ -0.53
IGKV2-28A0A075B6P5 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
IGKV2-28A0A075B6P5 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
IGKV2-28A0A075B6P5 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC11.74□□□□□ -0.53
IGKV2-28A0A075B6P5 CKBP1-201ENST00000565489 1086 ntBASIC11.74□□□□□ -0.53
IGKV2-28A0A075B6P5 AC026271.3-201ENST00000571884 352 ntBASIC11.74□□□□□ -0.53
IGKV2-28A0A075B6P5 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC11.74□□□□□ -0.53
IGKV2-28A0A075B6P5 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC11.74□□□□□ -0.53
IGKV2-28A0A075B6P5 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
IGKV2-28A0A075B6P5 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC11.74□□□□□ -0.53
IGKV2-28A0A075B6P5 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC11.74□□□□□ -0.53
IGKV2-28A0A075B6P5 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
IGKV2-28A0A075B6P5 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC11.74□□□□□ -0.53
IGKV2-28A0A075B6P5 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
IGKV2-28A0A075B6P5 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
IGKV2-28A0A075B6P5 UROS-202ENST00000368778 1556 ntTSL 2 BASIC11.74□□□□□ -0.53
IGKV2-28A0A075B6P5 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
IGKV2-28A0A075B6P5 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
IGKV2-28A0A075B6P5 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
IGKV2-28A0A075B6P5 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC11.74□□□□□ -0.53
IGKV2-28A0A075B6P5 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
IGKV2-28A0A075B6P5 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
IGKV2-28A0A075B6P5 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
IGKV2-28A0A075B6P5 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
IGKV2-28A0A075B6P5 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC11.74□□□□□ -0.53
IGKV2-28A0A075B6P5 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
IGKV2-28A0A075B6P5 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
IGKV2-28A0A075B6P5 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC11.74□□□□□ -0.53
IGKV2-28A0A075B6P5 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC11.74□□□□□ -0.53
IGKV2-28A0A075B6P5 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
IGKV2-28A0A075B6P5 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
IGKV2-28A0A075B6P5 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
IGKV2-28A0A075B6P5 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
IGKV2-28A0A075B6P5 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
IGKV2-28A0A075B6P5 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
IGKV2-28A0A075B6P5 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
IGKV2-28A0A075B6P5 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
IGKV2-28A0A075B6P5 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC11.73□□□□□ -0.53
IGKV2-28A0A075B6P5 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
IGKV2-28A0A075B6P5 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
IGKV2-28A0A075B6P5 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
IGKV2-28A0A075B6P5 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
IGKV2-28A0A075B6P5 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC11.73□□□□□ -0.53
IGKV2-28A0A075B6P5 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC11.73□□□□□ -0.53
IGKV2-28A0A075B6P5 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC11.73□□□□□ -0.53
IGKV2-28A0A075B6P5 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC11.73□□□□□ -0.53
IGKV2-28A0A075B6P5 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC11.73□□□□□ -0.53
IGKV2-28A0A075B6P5 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
IGKV2-28A0A075B6P5 CD99P1-205ENST00000527459 561 ntBASIC11.73□□□□□ -0.53
IGKV2-28A0A075B6P5 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC11.73□□□□□ -0.53
IGKV2-28A0A075B6P5 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC11.73□□□□□ -0.53
IGKV2-28A0A075B6P5 IRX5-204ENST00000560154 879 ntTSL 5 BASIC11.73□□□□□ -0.53
IGKV2-28A0A075B6P5 LINC00304-203ENST00000565008 1864 ntBASIC11.73□□□□□ -0.53
IGKV2-28A0A075B6P5 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC11.73□□□□□ -0.53
IGKV2-28A0A075B6P5 RPS15-203ENST00000586096 570 ntTSL 2 BASIC11.73□□□□□ -0.53
IGKV2-28A0A075B6P5 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
IGKV2-28A0A075B6P5 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
IGKV2-28A0A075B6P5 AC008741.2-201ENST00000612792 3115 ntBASIC11.73□□□□□ -0.53
IGKV2-28A0A075B6P5 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
IGKV2-28A0A075B6P5 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
IGKV2-28A0A075B6P5 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC11.73□□□□□ -0.53
IGKV2-28A0A075B6P5 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
IGKV2-28A0A075B6P5 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC11.73□□□□□ -0.53
IGKV2-28A0A075B6P5 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
IGKV2-28A0A075B6P5 LINC02199-201ENST00000506655 2702 ntBASIC11.73□□□□□ -0.53
IGKV2-28A0A075B6P5 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IGKV2-28A0A075B6P5 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IGKV2-28A0A075B6P5 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
IGKV2-28A0A075B6P5 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC11.72□□□□□ -0.53
IGKV2-28A0A075B6P5 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
IGKV2-28A0A075B6P5 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC11.72□□□□□ -0.53
IGKV2-28A0A075B6P5 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IGKV2-28A0A075B6P5 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC11.72□□□□□ -0.53
IGKV2-28A0A075B6P5 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC11.72□□□□□ -0.53
IGKV2-28A0A075B6P5 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC11.72□□□□□ -0.53
IGKV2-28A0A075B6P5 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
IGKV2-28A0A075B6P5 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IGKV2-28A0A075B6P5 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
IGKV2-28A0A075B6P5 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IGKV2-28A0A075B6P5 AC009102.3-201ENST00000623118 1491 ntBASIC11.72□□□□□ -0.53
IGKV2-28A0A075B6P5 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC11.72□□□□□ -0.53
IGKV2-28A0A075B6P5 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC11.72□□□□□ -0.53
IGKV2-28A0A075B6P5 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IGKV2-28A0A075B6P5 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
IGKV2-28A0A075B6P5 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
IGKV2-28A0A075B6P5 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
IGKV2-28A0A075B6P5 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC11.72□□□□□ -0.53
IGKV2-28A0A075B6P5 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
IGKV2-28A0A075B6P5 RPPH1-201ENST00000516869 333 ntBASIC11.72□□□□□ -0.53
IGKV2-28A0A075B6P5 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC11.72□□□□□ -0.53
IGKV2-28A0A075B6P5 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
IGKV2-28A0A075B6P5 AF186192.3-201ENST00000583427 947 ntBASIC11.72□□□□□ -0.53
IGKV2-28A0A075B6P5 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC11.72□□□□□ -0.53
IGKV2-28A0A075B6P5 MIR6786-201ENST00000616843 113 ntBASIC11.72□□□□□ -0.53
IGKV2-28A0A075B6P5 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC11.72□□□□□ -0.53
IGKV2-28A0A075B6P5 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
IGKV2-28A0A075B6P5 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
IGKV2-28A0A075B6P5 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IGKV2-28A0A075B6P5 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
IGKV2-28A0A075B6P5 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms